G51017


Basic Information

Item Value
gene id G51017
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 973711 ~ 973959 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58090
AGAGTCCTGTTTTCATTGAAAAAAAAAAAAAAAACTTGCTTTGACAACCTTTGAGGGAGGAGGTCAACTCTGGGGACTTTCTGGACTATCGGTGAGGGGCGTTGTGGGTGTGAAATTATACTGACATCATACATACATCCTCAACGGTGCCGCAATGGGCAAAGAGAGAGAGAGAGAGAGAAATAACTGGACGAAACCGCACTCTTTTGACGTCTGTGATGACCTCAGTGAAAACAGTGTGATGAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58090 True 249 lncRNA 0.33 1 973711 973959

Neighbor

gene id symbol gene type direction distance location
CI01000009_00920570_00955979 TBC1D4 coding upstream 17137 920428 ~ 956574 (+)
CI01000009_00913995_00916434 COMMD6 coding upstream 57146 913995 ~ 916565 (+)
CI01000009_00852319_00853083 CX45.6 coding upstream 120250 851242 ~ 853461 (+)
CI01000009_00805606_00808374 NA coding upstream 165307 804904 ~ 808404 (+)
CI01000009_00719164_00724772 SRPX coding upstream 248660 719164 ~ 725051 (+)
CI01000009_01034561_01035452 KLF12 coding downstream 60602 1034561 ~ 1035728 (+)
CI01000009_01110684_01111118 NA coding downstream 136725 1110684 ~ 1111601 (+)
CI01000009_01183737_01206031 NA coding downstream 208132 1182091 ~ 1206857 (+)
CI01000009_01219880_01224537 NA coding downstream 245678 1219637 ~ 1224869 (+)
CI01000009_01351236_01380055 CLYBL coding downstream 377277 1351236 ~ 1380285 (+)
G50933 NA non-coding upstream 64730 905332 ~ 908981 (+)
G51001 NA non-coding upstream 78840 894655 ~ 894871 (+)
G50954 NA non-coding upstream 92390 878271 ~ 881321 (+)
G50947 NA non-coding upstream 96290 874102 ~ 877421 (+)
G50984 NA non-coding upstream 132792 837940 ~ 840919 (+)
G51028 NA non-coding downstream 22085 996044 ~ 996272 (+)
G51031 NA non-coding downstream 27037 1000996 ~ 1001222 (+)
G50951 NA non-coding downstream 129319 1103278 ~ 1104484 (+)
G50972 NA non-coding downstream 130669 1104628 ~ 1105292 (+)
G50961 NA non-coding downstream 237591 1211550 ~ 1217229 (+)
G50920 NA other upstream 203478 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 877924 94371 ~ 97230 (+)
CI01000009_01431700_01434463 NA other downstream 448888 1429873 ~ 1435328 (+)
G51122 NA other downstream 706187 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 920276 1897343 ~ 1919516 (+)
G51274 NA other downstream 1281140 2255099 ~ 2350486 (+)
G51529 NA other downstream 2088074 3062033 ~ 3062587 (+)

Expression


Co-expression Network