G51062


Basic Information

Item Value
gene id G51062
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1482718 ~ 1482952 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58135
TGATGGAAGTCATTGGGCACCAAAACTATTTGGCTAACATTCCTCAAAATATCTTCTTTTGTGCTCCGCAAAAGAAAGAAAAGCATGCAGGTTTAGAAGACATGAGGGTTTTTGTCATAATTTTTGTCATAATTCCTACAAGTCCTTTTATATATTACTGGATAATGATTTAATTGTGCATTTTGGTGCACGCCAACATTATTGCTCCATTCCAGCTCTCAGTACTGGATAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58135 True 235 lncRNA 0.35 1 1482718 1482952

Neighbor

gene id symbol gene type direction distance location
CI01000009_01431700_01434463 NA coding upstream 48176 1429873 ~ 1435328 (+)
CI01000009_01402330_01407372 ZIC2A, ZIC2 coding upstream 74963 1401061 ~ 1407755 (+)
CI01000009_01351236_01380055 CLYBL coding upstream 102433 1351236 ~ 1380285 (+)
CI01000009_01219880_01224537 NA coding upstream 257849 1219637 ~ 1224869 (+)
CI01000009_01183737_01206031 NA coding upstream 275861 1182091 ~ 1206857 (+)
CI01000009_01570544_01595199 NA coding downstream 87127 1570079 ~ 1595466 (+)
CI01000009_01692563_01725364 ITGBL1 coding downstream 209611 1692563 ~ 1725364 (+)
CI01000009_01733394_01738937 ITGBL1 coding downstream 248342 1731294 ~ 1739468 (+)
CI01000009_01892219_01893628 NA coding downstream 409267 1892219 ~ 1893754 (+)
CI01000009_01897343_01919208 PIKFYVE coding downstream 414391 1897343 ~ 1919516 (+)
G50937 NA non-coding upstream 2252 1446595 ~ 1480466 (+)
G51059 NA non-coding upstream 130295 1352013 ~ 1352423 (+)
G51043 NA non-coding upstream 178650 1303599 ~ 1304068 (+)
G51041 NA non-coding upstream 191942 1290543 ~ 1290776 (+)
G51110 NA non-coding downstream 174107 1657059 ~ 1657370 (+)
G51125 NA non-coding downstream 257660 1740612 ~ 1863136 (+)
G51188 NA non-coding downstream 366875 1849827 ~ 1854511 (+)
G51193 NA non-coding downstream 382492 1865444 ~ 1865801 (+)
G51194 NA non-coding downstream 386690 1869642 ~ 1869855 (+)
G50920 NA other upstream 712485 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 1386931 94371 ~ 97230 (+)
G51122 NA other downstream 197194 1680146 ~ 1681966 (+)
G51274 NA other downstream 772147 2255099 ~ 2350486 (+)
G51529 NA other downstream 1579081 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 1719820 3202207 ~ 3208984 (+)

Expression


Co-expression Network