G51267


Basic Information

Item Value
gene id G51267
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2227654 ~ 2229104 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58420
ATTTCCTTCACTTGTGCACAAGTTATACTATGTTATTCTGTTTTGTCTGGTGCAATCCACAAAACTGCAAAGGAAAGTGACTAACTAGGAAGAGACTCAGTGGGCTGAACATCAGGAGGGGTTGTGAAAGAAACAAGAAAGTGAGAATGTCATATAAAAAATTCACAGGAAAGAACTGAACTGTACAGTTGAAGAGGTCTTCTGTTTGAACTTCAAATCCTAAAGGTAAATGCCTCAGAGAAAACAGACCTGGAACCAGATGGCAAATCTGAACCAGGCAGTCAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGGGTTTTGTACCTTGATGAACACAAAAACAACACCAACTGCATGAACAATGATAAATCTGTTGTTTAAAACAAGCAGACCAAAGACTGAAGAGTCTAAGTTGAGAAAGTTCAATGAACTTACATTCATATAACCGTTTCTTTCTTAAAACACCTGAAGAAAAAAAGGTCTTGAAGACATACAGTGCTGAGGCAGGTGTTTAAATTGTCCTCTGGTTTGAAGTTTCAGTCCTCTATCTGTTTTTGTTGTAGGTCTCAGGTAAACTGGCACTAAACATTATGCTGATCCATGAGTAGATGATGGTTGACTGGTCATAGCAGAAAGTTAGTGTCCAAACACTTAAAATTATGAAAAATATTAACTAAAAAATAACAACTTGCTCCAAATATGAAACCGGGGACAATATAAGGAAAAACGAATAATTTGGTGGGGGGAAAAACATGTTGAGTCAAATAAAAAATAATTTCCATGAGGAAAAAAAGGCTTTTAAAAACTAAAGAAAAAATAAAAATAATAAAAGCATTAATGTCAACCCTTCCTGAGAACAATCAGAAAAAAATAAATACACCCCATTCCTTGTTCCTCAGTGTGCATTTAAATGTGTATGTGTGTGAAGGGCAGACAGGGACAGGGCAATCAGTCCTGATTTTCTTGGCTGGTTTGTCAGTATCCCTGCAGTCCGTTATAAACCTTCTGAGATGGTGCCTGTTTCAGAAGTTGTCTTATACCTGAGAAAAAAAACATCTTTCTGCTGGTCATCAAGCTGCTCCTTGGGGAAATCTACATCAAAGGTGATTATGAGCGATCCACGGATATTGTTGTTGTCGAAATTTGGTAGGCCTTCACCCTTCTTCCAAATACGAGCTCCTGGCTTAGTGATTTTATCTCTCTCAATGTGCACCTACAAGACCAAAAGATGAGTCTCTGTGAGTTTGTGAAGAGTCTTATACAGGCCAAATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58420 True 1317 lncRNA 0.38 2 2227654 2229104

Neighbor

gene id symbol gene type direction distance location
CI01000009_02028234_02100154 PLCL1 coding upstream 127500 2028234 ~ 2100154 (+)
CI01000009_01993176_01999494 MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 coding upstream 227781 1993176 ~ 1999873 (+)
CI01000009_01990700_01991267 HSP10, HSPE1 coding upstream 236267 1990700 ~ 1991387 (+)
CI01000009_01966898_01976924 COQ10B coding upstream 249920 1966898 ~ 1977734 (+)
CI01000009_01897343_01919208 PIKFYVE coding upstream 308138 1897343 ~ 1919516 (+)
CI01000009_02233367_02235148 RABL3 coding downstream 4263 2233367 ~ 2235793 (+)
CI01000009_02284485_02285584 NA coding downstream 55381 2284485 ~ 2286129 (+)
CI01000009_02375481_02385887 NA coding downstream 145972 2375076 ~ 2386001 (+)
CI01000009_02398010_02399639 NA coding downstream 166961 2396065 ~ 2399752 (+)
CI01000009_02426085_02433745 CNGA4 coding downstream 196471 2425575 ~ 2433795 (+)
G51294 NA non-coding upstream 195 2226894 ~ 2227459 (+)
G51311 NA non-coding upstream 16342 2211083 ~ 2211312 (+)
G51261 NA non-coding upstream 75267 2151887 ~ 2152387 (+)
G51238 NA non-coding upstream 110933 2099278 ~ 2116721 (+)
G51185 NA non-coding upstream 182010 2038469 ~ 2045644 (+)
G51318 NA non-coding downstream 13021 2242125 ~ 2242332 (+)
G51265 NA non-coding downstream 13605 2242709 ~ 2363171 (+)
G51347 NA non-coding downstream 94163 2323267 ~ 2323857 (+)
G51358 NA non-coding downstream 139078 2368182 ~ 2368414 (+)
G51270 NA non-coding downstream 170674 2399778 ~ 2400894 (+)
G51122 NA other upstream 545688 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 789299 1429873 ~ 1435328 (+)
G50920 NA other upstream 1457421 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 2131867 94371 ~ 97230 (+)
G51274 NA other downstream 25995 2255099 ~ 2350486 (+)
G51529 NA other downstream 832929 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 973668 3202207 ~ 3208984 (+)
G53388 NA other downstream 3293138 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3631198 5931718 ~ 5943899 (+)

Expression


Co-expression Network