G106029


Basic Information

Item Value
gene id G106029
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 23976606 ~ 23977792 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU143233
cactcacacacacacgcactctctctcacacacacactcaaacatgcacactctctctctcacacacacactcaaacacgcacacacatactatacacaTCGTTCAGTCAGGGAGAGTTCTGTAACGGTTTAGTCGGAGAGAGTTCTGTAACGGTTTAGTCGGAGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGAGAGAGTTCTGTAACGGTTTAGACGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTGTAACGGTTTAGTCGGAGAGAGTTCTGTAACGGTTTAGACGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTTCAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGACGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTTCAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTGTAACGGTTTAGTCGGGAAGAGTTCTTCAACGCTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGGAGAGTTCTTCAACGCTTTAGTCGGGGAGAGTTCTGTAACGGTTTAGTCGGGGGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143233 True 898 lncRNA 0.48 3 23976606 23977792

Neighbor

gene id symbol gene type direction distance location
LOC103035907 NA coding upstream 337718 23632379 ~ 23638888 (+)
chtf18 chtf18,LOC107725360 coding upstream 423908 23524716 ~ 23552698 (+)
plk1 plk1,LOC107722962 coding upstream 486401 23480456 ~ 23490205 (+)
LOC107197111 NA coding upstream 517091 23454456 ~ 23459515 (+)
LOC103041889 NA coding upstream 537503 23434867 ~ 23439103 (+)
slitrk6 slitrk6,LOC107674010,LOC107730399,LOC107558904,LOC107737039,LOC107574216,LOC107698122 coding downstream 1099144 25076936 ~ 25102573 (+)
LOC103022503 NA coding downstream 1395014 25372806 ~ 25374832 (+)
LOC103023109 NA coding downstream 1405080 25382872 ~ 25386300 (+)
LOC111193564 NA coding downstream 1441748 25419540 ~ 25422258 (+)
LOC103025458 NA coding downstream 1445920 25423712 ~ 25449279 (+)
G106022 NA non-coding upstream 43433 23932834 ~ 23933173 (+)
G106003 LOC108439158 non-coding upstream 86522 23870412 ~ 23890084 (+)
G105990 NA non-coding upstream 242824 23733421 ~ 23733782 (+)
G105984 NA non-coding upstream 287232 23689146 ~ 23689374 (+)
G105974 NA non-coding upstream 327947 23648430 ~ 23648659 (+)
G106038 NA non-coding downstream 21559 23999351 ~ 24003570 (+)
G106054 NA non-coding downstream 62470 24040262 ~ 24040717 (+)
G106026 NA non-coding downstream 141988 24119780 ~ 24120495 (+)
G106101 NA non-coding downstream 143180 24120972 ~ 24121204 (+)
G106155 NA non-coding downstream 530220 24508012 ~ 24508429 (+)
G106017 si:ch73-12o23.1,LOC108439175,LOC108258846,LOC107722961,LOC107590719 other upstream 52835 23915635 ~ 23923771 (+)
LOC103038624 zgc:77849,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708,LOC107564565 other upstream 1156510 22810079 ~ 22820096 (+)
LOC103045705 LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 other upstream 1387645 22525257 ~ 22588961 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other upstream 1693153 22255085 ~ 22283453 (+)
G105357 NA other upstream 2607402 21327192 ~ 21369204 (+)
G106036 NA other downstream 9415 23987207 ~ 23989592 (+)
G106146 NA other downstream 433416 24411208 ~ 24413098 (+)
LOC111193563 NA other downstream 1383952 25361744 ~ 25369439 (+)
LOC111193565 NA other downstream 1481023 25458815 ~ 25570821 (+)
LOC103037236 NA other downstream 2176625 26154417 ~ 26171801 (+)

Expression


Co-expression Network