G107117


Basic Information

Item Value
gene id G107117
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 29780326 ~ 29780927 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144751
ctctaaaataccaggacattttaaaacaaaatctggtggcttctgcccgaaagctgaagatgggtcgtcactgggtctttcagcaagataatgaccctaaacatgtggccaaatctacacagaaatggttcaccgcacacagaatcaagctcctcccatggccatctcagtccccagacctcaaccccattgaaaacctgtggggtgagctgaagaggagagtgcagaggagaggacccaggtcgttggatgatttagagagaatgtgcaaagaggaatggtcaaagatccctctttctgtattctcccatcttgtgaaacattacaggagaagattaggtgctgttttgttggcaaaagggggttgtacaaagtattaacatcaggggtgctaataattgtggcacacatgatttgatgttaaataattatttcttaatgtgggatttttttcctactgaataaattcacttgagttaaaggttgtattttactctttttttccatcgtggtcctatattattttgaacaaaactcaatttatgagaagctaaagaacacatcttaaccaggggtgccaataattatggagggcactgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144751 True 602 TUCP 0.41 1 29780326 29780927

Neighbor

gene id symbol gene type direction distance location
LOC111193470 NA coding upstream 121904 29656537 ~ 29658422 (+)
LOC103025432 NA coding upstream 192204 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 222283 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 260492 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 538729 29208551 ~ 29241597 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding downstream 63173 29844100 ~ 30451601 (+)
LOC111193471 NA coding downstream 759334 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 881072 30661999 ~ 30668744 (+)
gart gart coding downstream 891225 30672152 ~ 30711252 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 1480353 31261280 ~ 31300421 (+)
G107113 NA non-coding upstream 12332 29767531 ~ 29767994 (+)
G107111 LOC108264080 non-coding upstream 27086 29752736 ~ 29753240 (+)
G107106 NA non-coding upstream 59459 29720626 ~ 29720867 (+)
G107104 NA non-coding upstream 61919 29718172 ~ 29718407 (+)
G107096 NA non-coding upstream 81665 29696702 ~ 29698661 (+)
G107121 NA non-coding downstream 27648 29808575 ~ 29808815 (+)
G107127 NA non-coding downstream 50810 29831737 ~ 29831968 (+)
G107175 NA non-coding downstream 238037 30018964 ~ 30082411 (+)
G107178 NA non-coding downstream 241974 30022901 ~ 30023644 (+)
G107181 NA non-coding downstream 251026 30031953 ~ 30035249 (+)
LOC111193573 NA other upstream 620646 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 1056300 28703067 ~ 28724026 (+)
G106673 NA other upstream 1713343 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 1758279 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 3608525 26154417 ~ 26171801 (+)

Expression


Co-expression Network