LOC111193464


Basic Information

Item Value
gene id LOC111193464
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 28689555 ~ 28692305 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674372.1
ATAAtaaagaaagaggagagataCTGTACAGATCAGAACAGGAGGTGAAGAACGAGGGAGACACATCAGGACGAAGAAATCAGATCTGAACATCTAGATTCCAGAAATGGATCAGAAGTGGATCTCAGTTTTCTTGCTGTTCTCAGCTGTGTGTGGTGTATCTCCATATGTTCCTCATCGGTATCACTTTGTGGATCAGAATAAATCCTGGACTGAAGCTCAGAGCTACTGCAGAAAGACCTACACTGATCTGGCCACCATCAACAACATGGACGAGATGAAGAAGCTGAACAAGACTCTTATGGGTAAAGGTGGCAACTATGTTTGGATTGGTCTGGACCGTGGAGACAATGGGAAATGGCGGTGGTCTCTGCCAGACGAAAATTTCTACCACGTAGGAGATACAGACCAGAACTGGAACAACGGAGAACCAAACAATGCTGGAGAGAAGGAGTTCTGTGTTGCGATGAAGAAACAAGATGGAAAGTGGTTTGATGACAACTGTGAGAAAAGACatacttttgtgtgttttgacgtgatgggcagatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674372.1 True 550 mRNA 0.44 3 28689555 28692305

Neighbor

gene id symbol gene type direction distance location
LOC111193463 NA coding upstream 689703 27993999 ~ 27999852 (+)
LOC103043862 mx1 coding upstream 783910 27890718 ~ 27905645 (+)
LOC103047315 LOC108440455 coding upstream 881471 27802084 ~ 27808084 (+)
arglu1 NA coding upstream 921288 27759212 ~ 27768267 (+)
LOC111193461 cpo,LOC108258336 coding upstream 931458 27745088 ~ 27758097 (+)
LOC111193465 NA coding downstream 539 28692844 ~ 28697096 (+)
LOC111193466 NA coding downstream 9707 28702012 ~ 28702921 (+)
LOC111193571 NA coding downstream 93659 28785964 ~ 28791991 (+)
LOC111193468 NA coding downstream 119519 28811824 ~ 28815508 (+)
LOC111193570 NA coding downstream 148874 28841179 ~ 28865225 (+)
G106760 NA non-coding upstream 15619 28667114 ~ 28673936 (+)
G106754 NA non-coding upstream 65357 28623971 ~ 28624198 (+)
G106745 NA non-coding upstream 111066 28578211 ~ 28578489 (+)
G106718 NA non-coding upstream 303113 28385478 ~ 28386442 (+)
G106710 NA non-coding upstream 389304 28299588 ~ 28300251 (+)
G106791 NA non-coding downstream 34415 28726720 ~ 28727094 (+)
G106792 NA non-coding downstream 34981 28727286 ~ 28727720 (+)
G106795 NA non-coding downstream 41990 28734295 ~ 28734971 (+)
G106799 NA non-coding downstream 84241 28776546 ~ 28777037 (+)
G106800 NA non-coding downstream 85877 28778182 ~ 28778480 (+)
G106673 NA other upstream 622572 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 667508 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 2517754 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 3118734 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 3320116 25361744 ~ 25369439 (+)
LOC103027743 NA other downstream 10762 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 456760 29149065 ~ 29159680 (+)
G107117 NA other downstream 1088021 29780326 ~ 29780927 (+)

Expression


Co-expression Network