LOC111193465


Basic Information

Item Value
gene id LOC111193465
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 28692844 ~ 28697096 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674373.1
ATGCAGGAACAGCAGGAGTTTTTGGAGAGCCTTGTTTCCACGCTTCAAGACGGACAGCCGCTGGTATTACCCTCATTGATGTCTTCCCCCTGTGAATATGATGGGGAACACGGGACCTGTGAGGGCTTCATCATGCAGTGCTCCCTCTACCTCGACCATTTGTTGTGCCCTACCCTTCCAGAACTTATAAAGtcccagtctccatCCCCTGTCCCGTCTCCGTTCCAGGTCCTGTCCCCGTTtcatgtccagtctcagcccctgttCGGTCaaaataaaccaaCCACTAAGAGATACATATTAATTAATGACCAAAAGACCTGGCGTGAAGCTCAGAGCTACTGCAGAGAACATCACACAGATCTGGCCAGTGTGAGGAACGAGACTGAAAGACAGCAGATCACTGCTGCAGGAAATGGTGATCATTTCTGGATCGGCCTGTTTAAGGACTCCTGGAAGTGGTCAGATCAGAGTAACTCCTCATTCCGATACTGGAAATTTATGCAGCCAGATAATACTTATAATACAAAATGTGCTGCAGCTTCTGTGAATGACCAGGGTCAGTGGCATGATATAGGTTGTGAGGAACCGCACCCTTTCATCTGCCATGAGAATAAACTGATCTTGATCCAGCAGAATCTGAGCTGGAAAGGAGCTCTGAGATACTGCAGAGAGAATCATGTGGACCTGGTCTCAGTTCACTCTAAGGAGATCCAGCTCTGGGTGGAGGATGTGGCTCAGAATGCCTCCACTGATCATGTGTGGCTGGGTCTGCGTCACACCTGCACCCTCAGCCTCTGGTTCTGGATGAGTGGAGACTTTATCTGCTATGATAACTGGGCTCCGGGTAACGAGACAGAGGGAGAAGACTGCGATGATGCTCCAGAGGAAGAAGAGTGCAGTCCTGTAGAGAGAACCGGAGCGGTGCAGGCTAGAGGAGATCAGCAGTGGGTCAGCCTGCCTGAGAACCAGACTCTCAACTTCATCTGCATCAAATATGAAGaCTGAAACCAGGTGTGAAGCTTCTTCTGTCCTGGAATCAGCatctctaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674373.1 True 1053 mRNA 0.50 5 28692844 28697096

Neighbor

gene id symbol gene type direction distance location
LOC111193464 NA coding upstream 539 28689555 ~ 28692305 (+)
LOC111193463 NA coding upstream 692992 27993999 ~ 27999852 (+)
LOC103043862 mx1 coding upstream 787199 27890718 ~ 27905645 (+)
LOC103047315 LOC108440455 coding upstream 884760 27802084 ~ 27808084 (+)
arglu1 NA coding upstream 924577 27759212 ~ 27768267 (+)
LOC111193466 NA coding downstream 4916 28702012 ~ 28702921 (+)
LOC111193571 NA coding downstream 88868 28785964 ~ 28791991 (+)
LOC111193468 NA coding downstream 114728 28811824 ~ 28815508 (+)
LOC111193570 NA coding downstream 144083 28841179 ~ 28865225 (+)
LOC111193469 NA coding downstream 428777 29125873 ~ 29127641 (+)
G106760 NA non-coding upstream 18908 28667114 ~ 28673936 (+)
G106754 NA non-coding upstream 68646 28623971 ~ 28624198 (+)
G106745 NA non-coding upstream 114355 28578211 ~ 28578489 (+)
G106718 NA non-coding upstream 306402 28385478 ~ 28386442 (+)
G106710 NA non-coding upstream 392593 28299588 ~ 28300251 (+)
G106791 NA non-coding downstream 29624 28726720 ~ 28727094 (+)
G106792 NA non-coding downstream 30190 28727286 ~ 28727720 (+)
G106795 NA non-coding downstream 37199 28734295 ~ 28734971 (+)
G106799 NA non-coding downstream 79450 28776546 ~ 28777037 (+)
G106800 NA non-coding downstream 81086 28778182 ~ 28778480 (+)
G106673 NA other upstream 625861 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 670797 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 2521043 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 3122023 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 3323405 25361744 ~ 25369439 (+)
LOC103027743 NA other downstream 5971 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 451969 29149065 ~ 29159680 (+)
G107117 NA other downstream 1083230 29780326 ~ 29780927 (+)

Expression


Co-expression Network