LOC111193466


Basic Information

Item Value
gene id LOC111193466
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 28702012 ~ 28702921 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674374.1
AAGAAATCAGATCTGAACGTCTAGATTCCAGAAATGGATCAGAAGTGGATCTTAGTTTTCTGGCTGTTCTCAGCTGTGTGTGGTGTATCTCCATACGTTCCTCATCGGTATCACTTTGTGGATCAGAGTAAAACCTGGACTGAAGCTCAGAGATACTGCAGACAGACCTACACTGATCTGGCCACCATCAACAACATGGACGAGATGAAGAAGCTGAACGAGACTCTGAAGGATAAAACTCAAGCCTTTGTGTGGATCGGTCTGAACAGAGGGGACACTGAGAAATGGAGGTGGTCTCTGCCAGACGGAAATTTCTACACTGTAGAAGATAAAAACCAGACCTGGAGAAGTGGAGAACCAAATAATTATGGAGGatGCATTAGTATGGACCTCAACACAGACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674374.1 True 405 mRNA 0.45 3 28702012 28702921

Neighbor

gene id symbol gene type direction distance location
LOC111193465 NA coding upstream 4916 28692844 ~ 28697096 (+)
LOC111193464 NA coding upstream 9707 28689555 ~ 28692305 (+)
LOC111193463 NA coding upstream 702160 27993999 ~ 27999852 (+)
LOC103043862 mx1 coding upstream 796367 27890718 ~ 27905645 (+)
LOC103047315 LOC108440455 coding upstream 893928 27802084 ~ 27808084 (+)
LOC111193571 NA coding downstream 83043 28785964 ~ 28791991 (+)
LOC111193468 NA coding downstream 108903 28811824 ~ 28815508 (+)
LOC111193570 NA coding downstream 138258 28841179 ~ 28865225 (+)
LOC111193469 NA coding downstream 422952 29125873 ~ 29127641 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding downstream 505630 29208551 ~ 29241597 (+)
G106760 NA non-coding upstream 28076 28667114 ~ 28673936 (+)
G106754 NA non-coding upstream 77814 28623971 ~ 28624198 (+)
G106745 NA non-coding upstream 123523 28578211 ~ 28578489 (+)
G106718 NA non-coding upstream 315570 28385478 ~ 28386442 (+)
G106710 NA non-coding upstream 401761 28299588 ~ 28300251 (+)
G106791 NA non-coding downstream 23799 28726720 ~ 28727094 (+)
G106792 NA non-coding downstream 24365 28727286 ~ 28727720 (+)
G106795 NA non-coding downstream 31374 28734295 ~ 28734971 (+)
G106799 NA non-coding downstream 73625 28776546 ~ 28777037 (+)
G106800 NA non-coding downstream 75261 28778182 ~ 28778480 (+)
G106673 NA other upstream 635029 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 679965 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 2530211 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 3131191 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 3332573 25361744 ~ 25369439 (+)
LOC103027743 NA other downstream 146 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 446144 29149065 ~ 29159680 (+)
G107117 NA other downstream 1077405 29780326 ~ 29780927 (+)

Expression


Co-expression Network