Gene
RNA
| Item | Value |
|---|---|
| gene id | G53988 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 5730634 ~ 5730864 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61467 | True | 231 | lncRNA | 0.40 | 1 | 5730634 | 5730864 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_05724421_05725824 | NA | coding | downstream | 4800 | 5723841 ~ 5725834 (-) |
| CI01000009_05675971_05682578 | NA | coding | downstream | 47251 | 5675772 ~ 5683383 (-) |
| CI01000009_05571226_05587885 | NA | coding | downstream | 142619 | 5570501 ~ 5588015 (-) |
| CI01000009_05513478_05515588 | NA | coding | downstream | 215046 | 5513269 ~ 5515588 (-) |
| CI01000009_05402729_05410456 | NA | coding | downstream | 320178 | 5402504 ~ 5410456 (-) |
| CI01000009_05759177_05759509 | NA | coding | upstream | 28135 | 5758999 ~ 5759770 (-) |
| CI01000009_05784097_05785842 | FZD5 | coding | upstream | 53201 | 5784065 ~ 5785842 (-) |
| CI01000009_05798886_05836104 | PLEKHM3 | coding | upstream | 67018 | 5797882 ~ 5838430 (-) |
| CI01000009_05844758_05855489 | IDH1 | coding | upstream | 113264 | 5844128 ~ 5855944 (-) |
| CI01000009_05949578_05961385 | ARMC8 | coding | upstream | 218714 | 5949578 ~ 5961385 (-) |
| G53916 | NA | non-coding | downstream | 133956 | 5585039 ~ 5596678 (-) |
| G53566 | NA | non-coding | downstream | 177533 | 5552890 ~ 5553101 (-) |
| G53556 | NA | non-coding | downstream | 183997 | 5539205 ~ 5546637 (-) |
| G53552 | NA | non-coding | downstream | 190946 | 5523644 ~ 5539688 (-) |
| G53514 | NA | non-coding | downstream | 221845 | 5506972 ~ 5508789 (-) |
| G53997 | NA | non-coding | upstream | 15711 | 5746575 ~ 5746788 (-) |
| G54000 | NA | non-coding | upstream | 21076 | 5751940 ~ 5752165 (-) |
| G54032 | NA | non-coding | upstream | 262321 | 5993185 ~ 5993404 (-) |
| G54065 | NA | non-coding | upstream | 288182 | 6019046 ~ 6019356 (-) |
| G54068 | NA | non-coding | upstream | 291749 | 6022613 ~ 6022827 (-) |
| G53515 | NA | other | downstream | 225386 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 1499165 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 2468677 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 2831227 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 3168101 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 2694957 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 3127288 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 6557353 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 8244524 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 8302700 | 14033564 ~ 14037873 (-) |
