G53723


Basic Information

Item Value
gene id G53723
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 6036196 ~ 6036429 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU61191
GTTCAGTCACTTTGTGGCGGTTAATGCCTGATCAAAAAACAAAACCAAAAAAAAAAAACCATACGTATAAAAACATATATTTGGATATAGTTATTAAACATTTCCATTGGGTATAGGCAGAACATAAGCTAATTTAAAAACAAAAAAACTAAACACGAACGTTCATGACAGATGTCACTGTCAACTCCTTGCTACTCGCATGTGATTGCAAAGAACGGCATCTCTTGGGTGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61191 True 234 lncRNA 0.35 1 6036196 6036429

Neighbor

gene id symbol gene type direction distance location
CI01000009_06002120_06017019 GTF2E1 coding upstream 18414 6002120 ~ 6017782 (+)
CI01000009_05992944_05994452 CRYGS, CRYGS1, CRYGS2 coding upstream 41704 5992944 ~ 5994492 (+)
CI01000009_05983361_05989883 TBCCD1 coding upstream 45613 5983361 ~ 5990583 (+)
CI01000009_05968963_05974380 DBR1 coding upstream 61446 5967459 ~ 5974750 (+)
CI01000009_05931829_05943829 KCNH3 coding upstream 92297 5931718 ~ 5943899 (+)
CI01000009_06130188_06193279 STXBP5L coding downstream 93635 6130064 ~ 6193404 (+)
CI01000009_06195742_06204011 KDELC1 coding downstream 159313 6195742 ~ 6204349 (+)
CI01000009_06205817_06207701 TEX30 coding downstream 169388 6205817 ~ 6207711 (+)
CI01000009_06212264_06213131 NA coding downstream 175835 6212264 ~ 6213815 (+)
CI01000009_06943591_06952628 NA coding downstream 905195 6941624 ~ 6953067 (+)
G53675 NA non-coding upstream 140584 5859197 ~ 5895612 (+)
G53646 NA non-coding upstream 190372 5844049 ~ 5845824 (+)
G53676 NA non-coding upstream 255078 5780584 ~ 5781118 (+)
G53637 NA non-coding upstream 289245 5746575 ~ 5746951 (+)
G53632 NA non-coding upstream 293730 5742252 ~ 5742466 (+)
G53733 NA non-coding downstream 9092 6045521 ~ 6045723 (+)
G53666 NA non-coding downstream 28638 6065067 ~ 6095605 (+)
G53661 NA non-coding downstream 178644 6215073 ~ 6215460 (+)
G53669 NA non-coding downstream 179239 6215668 ~ 6244368 (+)
G53886 NA non-coding downstream 483470 6519899 ~ 6530269 (+)
G53388 NA other upstream 497142 5522242 ~ 5540638 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 2827212 3202207 ~ 3208984 (+)
G51529 NA other upstream 2973609 3062033 ~ 3062587 (+)
G51274 NA other upstream 3685710 2255099 ~ 2350486 (+)
G53651 NA other downstream 209135 6245564 ~ 6248392 (+)
G56100 NA other downstream 3092871 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 3816930 9853929 ~ 9856587 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 5724357 11761606 ~ 11766944 (+)
G57811 NA other downstream 5897513 11933942 ~ 11935251 (+)

Expression


Co-expression Network