arglu1


Basic Information

Item Value
gene id arglu1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 27759212 ~ 27768267 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674943.1
GCACATGCGCAGTGGAGTAGTCGGTGATCACGGCAGCGGGTCGGTGGTGATTGTGAATTCAGCCCCGAACTAAAGTCTCTAAACCCGGCGAGCCGCGGCGTATTTACCGCTTCCCGGAGCTCCAGCGAGCCGCGACGGATTTATCGCTCCAGCGGGACGCGGGTCTGCTCGGAGCCGAGTAGCAGCGCGGGCAGCCCGGCCAGCACCCGGTCCGTGCAGCGGTGCTGCTGCGAAACAGCGCGGCTAGCAGGGGAAGTAGCTAGCGGGGCTAACGGCGCGGACCCGCCGCCGCAGCAGCCGCGATGGGCCGGTCCCGGAGCCGCAGCTCCTCCCACTCTAAGCGCTCTAAGAGCGGCGGGGGGAAGCACGGCAAGAAGCGCAGCCGCTCCCGCTCCAGAGAGAAGAAGCGCCGCTCCAAGAGCCGCGAGTCCAAGAGGAACCGCCGCCGGGAGTCGCGCTCCCGATCTCGCTCAGAGACCGCGCCATCCCGCCGGGAGAGGGAGCGGGAGAGGGCCGCCTCGCCCCCGGACAGGATCGACATCTTCGGGCGGACCCTGAGCAAGAGGAGCGCCGGGGACGAGAagcagaagaaggaggaggaggagaagcgGGCCGAGCTGGAGCGGCAGAGGAGCATCCGGCAGCAGGAAATCGAGGAGCGTCTGATTGAGGAGGAGACAGCGCGGCGGGTGGAGGAGCTGGTGGCTAAGCgggtggaggaggagctggagaagaGGAAGGATGAGATCGAGCGGGAGGTGCTGAGGAGGGTGGAGGAGGCCAAGCGCATCATGGAGAAGCAGCTTCTGGAGGAGCTCGAAAGGCAGAGACAGGCCGAGCTGGAGACCCAGAAAGCCCGCGAGGAGGAGGAGAAATCGAAGCGGGAGGAGCTGGAGAAGATTCTGGTGGAGAACAACCGCAAGATCGCAGACGCTCAGGCTAAACTGGCGGAGGAGCAGCTCCGGATCGTGGAGGAGCAGCGTAAGATCCACGAGGAGAGAATGAAGCTGGAGCAGGAGAGACAGAGGCAGCAGAAGGAGGAGCAGAGGATCATCCTGGGGAAGGGCAAGTCCCGACCCAAACTGTCCTTCTCATTGAAAGCTACGGAATGACCAACAGGGGGCAGTCTACCGCCTCTACGGACTCTGGAGCCcgtccatctctctttctctctctccctttatctctctttttctctctctcttttattccctCTCTCCtgggctctctctctccacaggcACCAGCCATTCAGCACAGATCCAGCGTGAGACGCGTATAAAACGTTTTTATGGTTGTATCTCTTGTTTTTAGCGAGTGGAGTTGAAGCTCCTCCCTGTTTTACAGCCTCGGTTTTTGTATTACTGACTGTTGTGTAGGAATCTGTCGACTACCTCCCTCTCGTCTCCCTGTCTCTCGTCTCCCTGTCTCACGTCTCCCTGTCTCCCTGTCTCAGAGGTGTGGGGAGAGAAACTCAAACGCACGGgataataaaatatgaacaatatggaggagaagaagagagcGGCGCTGAACTGGGAGCTCCAAGCTACTGTGGGGCGAATGATAGCGGcgtgttattttattgttttgttgttttattgttttattttgtaatttattcATGGATTAAACAAACCAGGACGAGTTCGGTGCTTGACCTTCAGCTCTCGGGTTCTTCAGGATGATCCTCCACCAGTTCTACACTCCAGTGAGAAGAAATACAGTGACATCCAGGATTTTATTAATGCGTTTTAGATCTCAAAA

Function

GO: NA

KEGG:

id description
K13173 ARGLU1; arginine and glutamate-rich protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674943.1 True 1767 mRNA 0.58 4 27759212 27768267

Neighbor

gene id symbol gene type direction distance location
LOC111193461 cpo,LOC108258336 coding upstream 1115 27745088 ~ 27758097 (+)
LOC103046391 NA coding upstream 20114 27729513 ~ 27739098 (+)
atic atic,pur9,LOC107556291,LOC107674004,LOC107750210 coding upstream 154981 27588049 ~ 27604231 (+)
LOC111193487 NA coding upstream 1116002 26638967 ~ 26643210 (+)
slitrk1 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding upstream 1243974 26511121 ~ 26515238 (+)
LOC103047315 LOC108440455 coding downstream 33817 27802084 ~ 27808084 (+)
LOC103043862 mx1 coding downstream 122451 27890718 ~ 27905645 (+)
LOC111193463 NA coding downstream 225732 27993999 ~ 27999852 (+)
LOC111193464 NA coding downstream 921288 28689555 ~ 28692305 (+)
LOC111193465 NA coding downstream 924577 28692844 ~ 28697096 (+)
G106572 NA non-coding upstream 125002 27630943 ~ 27634210 (+)
G106562 NA non-coding upstream 134511 27583377 ~ 27624701 (+)
G106564 NA non-coding upstream 148598 27609381 ~ 27610614 (+)
G106557 NA non-coding upstream 187566 27571336 ~ 27571646 (+)
G106555 NA non-coding upstream 189021 27569987 ~ 27570191 (+)
G106636 NA non-coding downstream 58320 27826587 ~ 27826848 (+)
G106644 NA non-coding downstream 137518 27905785 ~ 27906285 (+)
G106646 NA non-coding downstream 138689 27906956 ~ 27907211 (+)
G106648 NA non-coding downstream 144039 27912306 ~ 27914261 (+)
G106642 NA non-coding downstream 147280 27915547 ~ 27918196 (+)
LOC103037236 NA other upstream 1587411 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 2188391 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 2389773 25361744 ~ 25369439 (+)
G106146 NA other upstream 3346114 24411208 ~ 24413098 (+)
G106036 NA other upstream 3769620 23987207 ~ 23989592 (+)
G106661 lancl1 other downstream 246249 28014516 ~ 28022047 (+)
G106673 NA other downstream 298085 28066352 ~ 28066983 (+)
LOC103027743 NA other downstream 934800 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 1380798 29149065 ~ 29159680 (+)
G107117 NA other downstream 2012059 29780326 ~ 29780927 (+)

Expression


Co-expression Network