G58103


Basic Information

Item Value
gene id G58103
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13246341 ~ 13248989 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66168
TAGAGAAACAAGCTGATAAAAGACAAAGACAGGGAGAGTGAAGAGGAAATTGAAGAAAAAAATGTAAAAGAGGAGTGAAGGAGATTGAGATGAAGAAAGAGGTATTTTTTCAATAAAAAGAAAAACTGGTTTTCGATTCCCAACCCTATGACTGAAATGTGAAATGAGCGGCTGAAGCACGCAGCAGGACTTTGGGCACCATGCTGCCAACTTGGTAACACAGCTCATGCACCGCTTACAAAAACCATCACACACACCATTTCCATGTAATCTCACCCTCTCACTGCAGACTTACTGTAAAGACTTCATCTTGGTCCAAAGCATGTATTTCATGTCTCTGTCACATACTGGAACTCAGGGACTATGCTTGATGGTAAAGTGGAGTAATCATGTTTCCCCTATTTTGTGACTAAGTACCGATGCATTGGGCCGTCTGAAAATGTGTCTGGTGCGTTTGACTAATTTGGACTTCGTTCTCCTGCTGTAGCTGGCATGTCTGAGAAAAACAACAACATTTGTGGCTGATTCATGCAATAAAATCTAAGGAGAGAGAGTAAACAAGAGGAAAGGACACTACCGCTTTGGACACGTACTGTCATTTGTCATGCACATGTTTCACCGTCTGAAAGGAATGCTCTTAAATAGTCCAGACTTCAATAAACCTTTCTCCTGGTTCAGCTGGCACGTCTATGAAAAACAACAACATGTGTGGGTGCTTTCTCAGAAGGCAATCTGAATGGGAAAGTGTGACATTTCTGACATTTGCAACAGAGCATGGTTAGACTCAACACCAAAAGACTGTCTCTCCAAACCAGAGGAGGTAGAAATGCATTCAGGATGTTCAAGGGGAAAGTACAAATGAAATTCATGAGAAAACAGAGCAGATTTGATTCTATGACCTTGATTTCAAGGCGACAGTCAGACTCTGAAGTTCAATTTAGTTTAAGCTAATTTGTATAGTGCTTCTCACAATACATGTTTTAAAGCAACTTGCTTGTTTCAGTGTTTAAATTTAGTAAGTATTCTGTTATTAGCCAGAGATGAGTGTATCAAGTTAAAGGAATGTTCCAGGTTAAATACGAACACTGTGGATCACCATAGAAAATTGTTTTGATTTAACCCTCAGTTTGAAAAAAATGTAGGCCTGGTTTCATAGACGGGGCTTAAGACAGTATAAACATGCATTTTAATCTGGGACTACTAGGCTTAAGCCTTGTCTGTGAAACCAGGGAGTAAATTGTGTTTACAGTAAGGCACTTGCAATGGAAGACTATGGAGCAAGATATTGCACAGAGACAAAATATTATACACGTGTTATACTAGCCTTGCCTTTGCCTTGCTCTCAAGCTGCTAAACAATGTAACTTTTACATAATGTACCCAGATACCAGAAAGAGCAAACATCCGTGAAATAAATTCTTACACGGAGCAAATTGACAGAACATAACTAGCACTCTCACCACTAAAATGGTGATTTTGTATAGAAGTATTAAAGTGCACTGTCAAGTGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66168 True 1512 lncRNA 0.39 2 13246341 13248989

Neighbor

gene id symbol gene type direction distance location
CI01000009_13194613_13197758 NA coding upstream 46640 13194437 ~ 13199701 (+)
CI01000009_12854692_12859028 NA coding upstream 385310 12854193 ~ 12861031 (+)
CI01000009_12646484_12653748 GULP1, GULP1A coding upstream 592484 12646484 ~ 12653857 (+)
CI01000009_12504532_12504815 NA coding upstream 741447 12504380 ~ 12504894 (+)
CI01000009_12432736_12435509 NA coding upstream 810450 12432538 ~ 12436017 (+)
CI01000009_13394582_13476351 UBE2E3 coding downstream 143317 13392306 ~ 13476807 (+)
CI01000009_13549003_13580198 ITGA4 coding downstream 300014 13549003 ~ 13580233 (+)
CI01000009_13696525_13718933 SSFA2 coding downstream 447536 13696525 ~ 13718933 (+)
CI01000009_13752424_13753460 NA coding downstream 503435 13752424 ~ 13753823 (+)
CI01000009_13798741_13799037 NA coding downstream 547895 13796884 ~ 13799191 (+)
G58088 NA non-coding upstream 20660 13224840 ~ 13225681 (+)
G58023 NA non-coding upstream 121449 13123177 ~ 13124892 (+)
G58004 NA non-coding upstream 184761 13041813 ~ 13061580 (+)
G58005 NA non-coding upstream 199166 13040326 ~ 13047175 (+)
G57739 NA non-coding upstream 320099 12923993 ~ 12926242 (+)
G58118 NA non-coding downstream 20417 13269406 ~ 13269639 (+)
G58153 NA non-coding downstream 86646 13335635 ~ 13335862 (+)
G58155 NA non-coding downstream 95191 13344180 ~ 13344479 (+)
G58159 NA non-coding downstream 97510 13346499 ~ 13346746 (+)
G58160 NA non-coding downstream 97926 13346915 ~ 13347153 (+)
G58028 NA other upstream 102733 13140378 ~ 13143608 (+)
G57701 NA other upstream 223203 13006643 ~ 13023138 (+)
G57691 NA other upstream 327876 12906444 ~ 12918465 (+)
G57682 NA other upstream 354002 12825469 ~ 12892339 (+)
G58382 NA other downstream 784570 14039757 ~ 14039901 (+)
G58455 NA other downstream 997706 14246695 ~ 14258526 (+)
G58558 NA other downstream 1247947 14496936 ~ 14501514 (+)
G58649 NA other downstream 1400735 14649724 ~ 14652022 (+)
G58711 NA other downstream 1517670 14766659 ~ 14773773 (+)

Expression


Co-expression Network