G58454


Basic Information

Item Value
gene id G58454
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14402649 ~ 14403582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66582
TATTTATTTTTATTTAAATGTATTCATTTATTTTATATTTATTTTTCATGTTTTTCATCACTATTATTATTTTTATTCATTTGTTTGATTTATATATATTTTTTTATATGAATGGATTTATACATGAAAATATATGGCTATATAAATTTTAGGAAGGGGGTTACTCAGAAGGGGATAATCATGTTAGGGGCTCCCTATAATCAAAAAGTTTTTAAAAAACCCACTGTATCCCACAATGCAGTGTGCCTGACCTGATCATCTATTTTCAGTCTGATAAATGAATCTCGATCATTTGATCAGACTGCCAAGAATTAAGACATTTGTACACAAAATAGGATGAAAAATGCGTTTCTTAGATAATAACTAGATGCCAAGTTAATCGTGCAGCATGATGAGGTCATGTGACAACAATATAGCATACTCCTGAATGTTTTTCATTGCATAATGCATTCCATATAAGTATTAAGATTTCATACTCCATAGTTTGTACAGTATAAAAATCATTATGTCTATGGAAAGTCCCCATAAAACGTGTGTGTGTGGTCCTGGCAAACCCATACACGGACAAAATGTCCCCACAAAGATGGCAATATCCGAAATCATTGTCTTTGTGGGCACATTTTTTGGTCCCCATGAGGAAAACAGCTTATAAATCATATTAAGTGATGTTTTTTGAAAATGTAAAAATGCAGAAAGTTCTCTGTAATGAGTGGGTTTAGAGGTATAGAATATACAGTTTGTACTGTATAAAAATGATTATGTCTGTGGAATGTCCCTATAAAACATGAAAACCCAGCCTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTTTGACAGTTTGGTGAAGCGTTAGCTGTGGACTGGCCCTGACTAAACTAGCCAAACTCTGTGCATAAACATTTCAACCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66582 True 908 lncRNA 0.32 2 14402649 14403582

Neighbor

gene id symbol gene type direction distance location
CI01000009_14380226_14386430 ASB1 coding upstream 15783 14380226 ~ 14386866 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding upstream 26966 14348389 ~ 14375683 (+)
CI01000009_14296451_14314340 ADARB1A, ADARB1B, ADARB1 coding upstream 88300 14296451 ~ 14314349 (+)
CI01000009_14264935_14273006 NA coding upstream 128920 14263423 ~ 14277555 (+)
CI01000009_14242224_14243004 NA coding upstream 158925 14242117 ~ 14243724 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding downstream 29134 14432716 ~ 14451542 (+)
CI01000009_14474300_14474593 NA coding downstream 70718 14471796 ~ 14474770 (+)
CI01000009_14581261_14582899 NA coding downstream 177298 14580880 ~ 14582994 (+)
CI01000009_14595691_14611767 NA coding downstream 191854 14595436 ~ 14612569 (+)
CI01000009_14616605_14620028 NA coding downstream 211789 14615371 ~ 14620238 (+)
G58447 NA non-coding upstream 259 14393814 ~ 14402390 (+)
G58456 NA non-coding upstream 3298 14304940 ~ 14399351 (+)
G58452 NA non-coding upstream 200803 14198638 ~ 14201846 (+)
G58489 NA non-coding upstream 246418 14125320 ~ 14156231 (+)
G58558 NA non-coding downstream 93354 14496936 ~ 14501514 (+)
G58591 NA non-coding downstream 144668 14548250 ~ 14582261 (+)
G58568 NA non-coding downstream 169680 14573262 ~ 14584776 (+)
G58613 NA non-coding downstream 181474 14585056 ~ 14585281 (+)
G58455 NA other upstream 144123 14246695 ~ 14258526 (+)
G58382 NA other upstream 362748 14039757 ~ 14039901 (+)
G58028 NA other upstream 1259041 13140378 ~ 13143608 (+)
G57701 NA other upstream 1379511 13006643 ~ 13023138 (+)
G57691 NA other upstream 1484184 12906444 ~ 12918465 (+)
G58649 NA other downstream 246142 14649724 ~ 14652022 (+)
G58711 NA other downstream 363077 14766659 ~ 14773773 (+)
CI01000009_14857765_14859526 NA other downstream 415637 14857713 ~ 14859636 (+)
CI01000009_14925314_14952223 NA other downstream 521647 14924621 ~ 14952571 (+)

Expression


Co-expression Network