G64710


Basic Information

Item Value
gene id G64710
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17769247 ~ 17815728 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87358
ccgaattaaaaacctctggaatataatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttgaatttttacaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaaaactgtgattaaaaaacaggtttattccaccaaatattgattatttctgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87358 True 223 lncRNA 0.36 2 17769247 17815728

Neighbor

gene id symbol gene type direction distance location
LOC111192970 LOC108437139 coding upstream 5126 17748628 ~ 17764121 (+)
LOC107197389 NA coding upstream 23474 17732094 ~ 17745773 (+)
LOC111192980 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding upstream 49389 17707970 ~ 17719858 (+)
LOC111192975 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding upstream 66332 17690206 ~ 17702915 (+)
LOC111192910 cacng5b,LOC108437158,LOC107556612,LOC107698772,LOC107729207,LOC107664435 coding upstream 187119 17568799 ~ 17582128 (+)
otop2 otop2 coding downstream 44489 17860217 ~ 17879272 (+)
LOC111192979 NA coding downstream 108618 17924346 ~ 17929849 (+)
LOC103040205 NA coding downstream 169237 17984965 ~ 18132010 (+)
LOC103030006 LOC108437142,LOC105936201,LOC103140951,LOC107083146,LOC103468841,LOC102223636,LOC105899306,LOC105012845 coding downstream 345344 18161072 ~ 18172237 (+)
LOC107197388 NA coding downstream 360499 18176227 ~ 18193170 (+)
G64595 NA non-coding upstream 90805 17677928 ~ 17678442 (+)
G64586 NA non-coding upstream 95086 17622861 ~ 17674161 (+)
G64579 NA non-coding upstream 146575 17565712 ~ 17622672 (+)
G64583 NA non-coding upstream 173118 17588922 ~ 17596129 (+)
G64580 NA non-coding upstream 203790 17562563 ~ 17565457 (+)
G64753 NA non-coding downstream 141885 17957613 ~ 18008671 (+)
G64754 NA non-coding downstream 156851 17972579 ~ 18061330 (+)
G64760 NA non-coding downstream 183647 17999375 ~ 18000064 (+)
G64763 NA non-coding downstream 191426 18007154 ~ 18008138 (+)
G64764 NA non-coding downstream 196753 18012481 ~ 18348193 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other upstream 49335 17690209 ~ 17719912 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 881052 16833290 ~ 16888195 (+)
G64449 NA other upstream 893306 16873087 ~ 16875941 (+)
G64431 NA other upstream 1015687 16753043 ~ 16753560 (+)
G64289 NA other upstream 1326798 16439220 ~ 16442449 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 740400 18556128 ~ 18623499 (+)
LOC103045528 NA other downstream 1407481 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 1461074 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 1464564 19280292 ~ 19340879 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other downstream 1964935 19780663 ~ 19794325 (+)

Expression


Co-expression Network