G65276


Basic Information

Item Value
gene id G65276
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19609454 ~ 19610489 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88124
GATAATTTTATAAACCAAACATGgggatatgatttttttacagatCCATAGATGTTAATTTCAACTCAACAGATATACActtcatattattttttaagttttaggaATGAGGCTAACTGAGTACTTAACAACTGTAAATAAGTATGCTTGTGGGTCACTAAATAAAAACCTGCAGACACACAGGCCTTTTGTGTTTAaggtcactcactcactgatttATCCCCTGATAAATCCCGATTTATcttgtttaactttttaatgtCAAATAAATAAGCATTTATGTGACATGACACGTAAAAGAAGTCGATAGATAATTTTACTTGGCCTTTCATTTCGcttactatctttatttttctttacccTCAAATTGatgtaaaacagtaatttaataACAACTTCTAAAGTAAAATAGTCAACAGATAggctacaataaaaaaaataggaaaatgtGAAGAATGTTCTGAGTAATTTTAGTAAATAAACGTGCAGTCGACACCCTCGGTTTCTCACAAGATCTCGCGAGACTCTGGCATGGCGACAGATTTTGGCAGAGTACTGTTTTTGTCATTACAGCGGAAACGACGTTAAAGGATTGTGTGCGGCTATTAAGTCGTATTAAAGATAGAAAACGGGATTACATGACTTGTTTTTCGTATCTTTTGGTTCGTTATTGGTGGATTTTAACGCGTAACCCGACATAATGAAACGTTTGTTTAGGTTAGCGTTTTAGCATGGTGTGTTGCCAAATTACCAAAATGTGCAGCTGTGCTGCTTCCAGCCATGGAAACATTTGTGTTTGTTGTGCTTAAATTCGATTTATTTCTCACGAGTAGGATAGTCTTTTTTGTCTCAAacttaaatgatacatttttaattacgGTCTAATTCATTTTAACATGTTACAAATGaccaaatttaataaataaaaaaaagtaaactcgAATATACATTAATATCTGTAGATGTTATTTGTAATTCTGATGGCTATGAGGAAGACGATGGTAATGACTGAATAAATAAAGGCAAACAAAACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88124 True 1036 lncRNA 0.33 1 19609454 19610489

Neighbor

gene id symbol gene type direction distance location
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding downstream 94071 19409298 ~ 19515383 (-)
LOC103035518 nptx1l,LOC108435874 coding downstream 487994 19111133 ~ 19121460 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 890824 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 1019384 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 1034285 18567677 ~ 18575169 (-)
lhfpl3 lhfpl3 coding upstream 55070 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 122266 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 443462 20053951 ~ 20064790 (-)
myf5 myf5,LOC107734855 coding upstream 572605 20183094 ~ 20189701 (-)
myf6 myf6 coding upstream 591609 20202098 ~ 20205655 (-)
G65279 NA non-coding downstream 2953 19606290 ~ 19606501 (-)
G65273 NA non-coding downstream 16341 19592294 ~ 19593113 (-)
G65271 kdm7a,LOC106573199 non-coding downstream 20996 19580127 ~ 19588458 (-)
G65267 NA non-coding downstream 34945 19510800 ~ 19574509 (-)
G65256 NA non-coding downstream 183254 19402344 ~ 19426200 (-)
G65277 NA non-coding upstream 446 19610935 ~ 19611878 (-)
G65339 NA non-coding upstream 59058 19669547 ~ 19672117 (-)
G65347 NA non-coding upstream 116818 19727307 ~ 19849574 (-)
G65342 NA non-coding upstream 136396 19746885 ~ 19749668 (-)
G65354 golgb1,LOC108279640 non-coding upstream 157693 19768182 ~ 19769869 (-)
ndufb2 ndufb2 other downstream 3729 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 238746 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 325422 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 585796 18898185 ~ 19023658 (-)
LOC111192971 LOC108435850 other downstream 959111 18638307 ~ 18650343 (-)
llph llph other upstream 184665 19795154 ~ 19799602 (-)
ost4 NA other upstream 1934929 21545418 ~ 21574199 (-)
G65803 gen1 other upstream 2019469 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 2680196 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 3442784 23053273 ~ 23160179 (-)

Expression


Co-expression Network