G66004


Basic Information

Item Value
gene id G66004
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22131088 ~ 22131593 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89057
AGTGGGGAGAGTACCTGGCCTCCATTACGTGCTTGGGCAGCAGCAGCAAGAGAAGgTGCTGCTGGATAGTgcagtttttaatgatttagcTGCTGTTCGTGTGCATGTTGGAGAGGAGCGGAGACAGAGCAGAGAACTGTTTTGGGCAGGTGCTGCTGTTTCACTCGACTCTCATCATACATTGGAAAGAGtATTCATTGTCCAAGTTCACAAGAAGGCTGGGGTGCTCCTGATTTTTCCCTTTCCCTCCATGTGCTTAGAGGATATCTCAAGACTGCAAGGg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89057 True 283 lncRNA 0.49 3 22131088 22131593

Neighbor

gene id symbol gene type direction distance location
LOC111192879 NA coding downstream 141018 21989255 ~ 21990070 (-)
LOC103040999 LOC103040999 coding downstream 160446 21965977 ~ 21970642 (-)
LOC103040407 NA coding downstream 253386 21823896 ~ 21877702 (-)
mrps10 NA coding downstream 312940 21809285 ~ 21818148 (-)
LOC103044186 NA coding downstream 744629 21374232 ~ 21386459 (-)
cog5 cog5,LOC107583928,LOC107656447,LOC107658957 coding upstream 117294 22248887 ~ 22273098 (-)
LOC103043373 LOC108435080,LOC108279430,LOC107729145,LOC107656392,LOC107590530,LOC107583931,LOC107708018,LOC107658953 coding upstream 173612 22305205 ~ 22352523 (-)
pde3a pde3a,LOC107707962 coding upstream 231561 22363154 ~ 22401341 (-)
ada2 cecr1,LOC108442796 coding upstream 779594 22911187 ~ 22930186 (-)
LOC103026244 atp6v1e1b,atp6v1e1,LOC103026244,LOC108442797,LOC107658907,LOC107583987,LOC100708725 coding upstream 798629 22930222 ~ 22937099 (-)
G65963 NA non-coding downstream 165392 21964958 ~ 21965696 (-)
G65950 NA non-coding downstream 169982 21959297 ~ 21961106 (-)
G65949 NA non-coding downstream 172170 21957494 ~ 21958918 (-)
G65948 rab21,zgc:154045,LOC106609839,LOC107690748,LOC107687573 non-coding downstream 174819 21932824 ~ 21956269 (-)
G65962 NA non-coding downstream 177137 21952379 ~ 21953951 (-)
G66022 NA non-coding upstream 30078 22161671 ~ 22162400 (-)
G66052 NA non-coding upstream 147504 22279097 ~ 22279414 (-)
G66080 bcap29 non-coding upstream 161504 22293097 ~ 22298282 (-)
G66074 NA non-coding upstream 167888 22299481 ~ 22361569 (-)
G66084 NA non-coding upstream 179874 22311467 ~ 22313798 (-)
G65803 gen1 other downstream 446260 21629958 ~ 21684828 (-)
ost4 NA other downstream 556889 21545418 ~ 21574199 (-)
llph llph other downstream 2331486 19795154 ~ 19799602 (-)
ndufb2 ndufb2 other downstream 2525363 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 2760380 19305987 ~ 19370708 (-)
G66081 bcap29 other upstream 159092 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 921680 23053273 ~ 23160179 (-)
G66619 NA other upstream 2376241 24507834 ~ 24508281 (-)
G66642 NA other upstream 2528431 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 3384922 25516515 ~ 25530980 (-)

Expression


Co-expression Network