Gene
RNA
| Item | Value |
|---|---|
| gene id | G60953 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 382064 ~ 383981 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69401 | True | 888 | lncRNA | 0.34 | 3 | 382064 | 383981 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_00335493_00356496 | CEP104 | coding | downstream | 25568 | 335440 ~ 356496 (-) |
| CI01000010_00327845_00329442 | CUNH1ORF174 | coding | downstream | 52622 | 327227 ~ 329442 (-) |
| CI01000010_00154875_00293942 | NPHP4 | coding | downstream | 88122 | 154875 ~ 293942 (-) |
| CI01000010_00421834_00427873 | NA | coding | upstream | 37256 | 421237 ~ 428143 (-) |
| CI01000010_00517865_00522058 | NA | coding | upstream | 133531 | 517512 ~ 522058 (-) |
| CI01000010_00524503_00527976 | APEX2 | coding | upstream | 140418 | 524399 ~ 527976 (-) |
| CI01000010_00532752_00544586 | CSDE1 | coding | upstream | 148636 | 532617 ~ 544586 (-) |
| CI01000010_00553512_00562038 | NA | coding | upstream | 169432 | 553413 ~ 562038 (-) |
| G60958 | NA | non-coding | downstream | 15039 | 365887 ~ 367025 (-) |
| G61011 | NA | non-coding | downstream | 59861 | 320408 ~ 322203 (-) |
| G61007 | NA | non-coding | downstream | 110711 | 271108 ~ 271353 (-) |
| G60923 | NA | non-coding | downstream | 163897 | 129719 ~ 218167 (-) |
| G60572 | NA | non-coding | downstream | 277394 | 103909 ~ 104670 (-) |
| G61013 | NA | non-coding | upstream | 891 | 384872 ~ 386351 (-) |
| G61016 | NA | non-coding | upstream | 13089 | 397070 ~ 397384 (-) |
| G60952 | NA | non-coding | upstream | 55214 | 439195 ~ 439916 (-) |
| G60943 | NA | non-coding | upstream | 102401 | 486382 ~ 502688 (-) |
| G61035 | NA | non-coding | upstream | 180627 | 564608 ~ 564828 (-) |
| G61045 | NA | other | upstream | 188772 | 572753 ~ 575511 (-) |
| G61888 | NA | other | upstream | 860488 | 1244469 ~ 1246018 (-) |
| G61965 | NA | other | upstream | 1040444 | 1424425 ~ 1545051 (-) |
| CI01000010_03527436_03530341 | NA | other | upstream | 3145689 | 3527408 ~ 3530359 (-) |
| CI01000010_03890095_03899058 | SSBP3B, SSBP3, SSBP2 | other | upstream | 3506088 | 3890069 ~ 3899058 (-) |
