G98266


Basic Information

Item Value
gene id G98266
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8404421 ~ 8406569 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132457
cacagctgttaacttaaatgtatttccaataatgtaaaatataaaacatattttggtttgtttaacacttttttgtttactaaataattgcatatgtttttttttttttttataaatttaaggtgtgtccaaagttttgactggtactgtaggataatagtaaataaaatagctatgACAGAAGAACAGGGCATTTTTAGAGGCCCAGAGTCAAACTGTTATGTAAGAGTCTTGACTCTGACCAAAAATTAACCAAAGAAATGAGtgaaaacactaataaaataacTTGTTCTACAAAGAGACATTTTTTTGGAAAGAGTATACTGCAGTTTTTGCaagactttgactttgacattGCTATACCTGATCACTTTTGATTATTTTGTGTCtctacaattaataattttacagAAAACCCCTCTATAAGACCTTTGTATGGAGGATAGTCTTCAATCAGCTTTAAATAACAACTCAACAAATAAGAATCTtcaagaaatattaaatatttaatattttcataaccATACAACAGCCCTGCATTTATCTCAGACTGTATGAGTTGTCAAGGAAAGCCCTTTATAAAACTGACGCTTTTAACATGATTCACAAAATGTGAATTTCAGCAGTGACCTTCTTCTAACACACATTTCAAGAAGAGCTGATTAGattaatctaaataaagtcatttattGTCACTGAACAACAGAGTACAATGGAATTGGGTTCTTAGGACAAGggttgagaagaaaaaaaaacacacgtaTTCAGTGACGTAAATACTGGCATTGCAAACAGGGCAATCTCACTGGGGCCCCATGGTAACCAGGACCCCTGGCGTGTTTATTGGACCCTTAAACCATTGCTTATGCAATTTTACACACAGACCACAGCAAAACAGGTATGTGCAAAATAGGCTTTGATTATTACCAAGCAGTTTCAGAgctaatattgtcatttattgaCCTTATTAAGCATCATGTCTTTGGTTCCCCTACAAGCTAGGGCATCTTaagtagaatatcattgaaaagttattttatttcagtaatttactTTTCAGACCATCaatgattggtggaaacttcacactagacctcaagcagtttggactgtgtgtctctccactcttcctccagactctgctcccttgatttacaaataaatgtaaaaaatttactgatgatcagtgatggtttgaagagacatgtctCTCATGGGGTTCAGACACAGTTTCAATCTGAAGGAACCTATATTTATAACAGTGCACATTTTGATAGCACACAGTGGAGAATAGCAATACCATGAGCTGTGAAGGTGCAGTCCAGTTACAGTGTGACAGCATTGTCCGAGCTTTAGTAAAGCTTTcctctaaatatttaaaaatatctctGAAGAAACTGAAAAATTGATTgctaatcataataataatatcatgtGTATCAGATATGAAACTTTTAATACTACCGAATATCGGCACATCTACCACACGCTCTCCACCGATTCTCAAAAAGTCATTTAGAGGGGTTTGATGTGAAATGGCTCATTGAATGGAAACATACatatttaatcttttatttCCTATACAAATTACTACACAAGTGCAATTAGGCATGTCCAAccgattattattaatatataaaaaagt

Function

GO:

id name namespace
GO:0007599 hemostasis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132457 True 1645 lncRNA 0.34 2 8404421 8406569

Neighbor

gene id symbol gene type direction distance location
tyrobp tyrobp coding upstream 39808 8358553 ~ 8364613 (+)
LOC103025484 NA coding upstream 69066 8321393 ~ 8335355 (+)
LOC107197655 LOC108429979 coding upstream 83916 8314662 ~ 8320505 (+)
LOC103047702 NA coding upstream 92434 8295398 ~ 8311987 (+)
LOC103044944 NA coding upstream 109974 8290730 ~ 8294447 (+)
LOC103026621 klhl38,LOC108429983 coding downstream 21951 8428520 ~ 8433293 (+)
fbxo32 fbxo32,LOC107714740,LOC107723524,LOC107657681 coding downstream 37365 8443934 ~ 8458320 (+)
LOC103027501 NA coding downstream 70284 8476853 ~ 8481861 (+)
tbc1d31 tbc1d31 coding downstream 76160 8482729 ~ 8507085 (+)
LOC103021731 LOC108438272 coding downstream 107494 8514063 ~ 8527357 (+)
G98259 NA non-coding upstream 6768 8397297 ~ 8397653 (+)
G98256 NA non-coding upstream 23332 8380880 ~ 8381089 (+)
G98255 NA non-coding upstream 29479 8374634 ~ 8374942 (+)
G98249 NA non-coding upstream 54913 8348338 ~ 8349508 (+)
G98250 NA non-coding upstream 57341 8340044 ~ 8347080 (+)
G98270 NA non-coding downstream 32460 8439029 ~ 8439383 (+)
G98276 NA non-coding downstream 84325 8490894 ~ 8491276 (+)
G98277 NA non-coding downstream 87698 8494267 ~ 8494651 (+)
G98281 NA non-coding downstream 133432 8540001 ~ 8540507 (+)
G98282 NA non-coding downstream 134757 8541326 ~ 8542429 (+)
G97931 NA other upstream 1273612 7127804 ~ 7130809 (+)
G97926 NA other upstream 1334292 7068688 ~ 7070129 (+)
apoc1 NA other upstream 1338392 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 1722730 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 1839418 6532516 ~ 6565003 (+)
G98636 NA other downstream 905837 9312406 ~ 9312803 (+)
G98840 NA other downstream 1589635 9996204 ~ 10002046 (+)
G98845 NA other downstream 1653864 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 1765984 10172553 ~ 10178459 (+)
G98967 NA other downstream 2087222 10493791 ~ 10498518 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1773936 NA non-coding NC_048586.1 CM023240.2 8820854 ~ 8826155 (-)