G98840


Basic Information

Item Value
gene id G98840
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 9996204 ~ 10002046 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU133263
CAGTGAGCCATCTTGCAATAACTGTAATGGTCGTTACGACCAACCACAGTCTGGGAAACATGATTGTAGCAATAGAGcatgttcagaaaaaaaagacaaagattaGGACCAATCAGAGTCAAGGGAAGGTCTCAAAACTACAGTCAGTGAGCCATCTTGCAATAACTGTAATGGTCGTTACGACCAACCACAGTCTGGGAAACATGATTGTAGCAATAGAGcatgttcagaaaaaaaagacaaagattaGGACCAATCAGAGTCAAGGGAAGGTCTCAAACCTACTGATTTGCTGGGTAGGACCAATTACAGTCAGTGAGCCATCTCGAAATAACTGTCATGATCATTAAAACCAAGTCTGGAAAACATAAATGTACCAATAAAGCTTATCCAGCAGAAGATATACAATGATTATATTAGAAAACTCAGTCATTTCAATACTGTATTAGATTACTGTTAAATAGAGCATGACCATCAAAAGAGACCAATCAGGGTCAAGGGGAGGTCTTAAAATAATCACACGATGTACAGGACCAGTTGTGGTCGGCGGAGCTCTCAAAACAACTCATGTGTTGGGTGAGACCAATTATAAATCAGTGAGACATATTTAAACTTCTGTTTTGGACTTCTGGGGAATATAGATGTAGTAATAGGGCATGTCCAGTAGAAAGGATAGAATGATTCAAACCAATCAGAGTTAAGGTGAAGTCtcaaaactacttttttttttaagtaggaCCAAATACAAATCTCAAAATAACTGTCATGGTATTTTTGACCAACCAAAGTGAATGTAGAAATAGAGCCTGTCCAGCAAAAGAGATACAATGATTAGGACCAATCAGAGTCAATGGACATGAATGGACATAGCCATTAGGACTTGTAATAGTCTGTAAAATTTGGATGTAGCAATAGAGCATGGCCAGCAAAGGGAAAACAATGATTGGACCAATCAGGGTTAACAGGAGGTCTTAAAACAACTGATTTGATGGGTACCACCAATTGAAAGGTAGCACATCAACTGATGGGTTAGAAAGGACCAATTCCAGTGAGAGTGACATCTTAAAACAGTTGATATTGTCGTTAGGACCAATTACAGTCTGGAAAATGTGACATAGCAATTAAGCATCAGAGTCAATGGAAGGTCTTACACAAATCACTTGATGAACAATGATTAAGCAATTGCAACTGACATGATGGTTCGGACCAATCAAAGTCAGTAAGAGATGATGAGAATGTCTGGCATTCACCTTAGCTTTGGGCGTATCCATATATGTCCAGCTTttgccttaattttttttttttttaatcagttttagcTCATAACTGAGAAGTAGGAGGTGTTCTCGCCTTCAGAGCTGAAAGACATGGTTGTCCTGCGGCTTGATCCTTGACTGTGCAGCTCTCTGGCCAAGCCGAAGCTCCCCAGCCACACCTTACACATCTGGACCAGCTCACGGCGGAACTTGACGCCAACAAGACCATAAAGCAACGGGTTGAGGGCGCAGTGCAACAGTCCCAGGCTCTCTGTGACAAGGATGCCAATGTCCAGCGCCTTTTCCAAATCACAGCTGCGAAGTAGCCATTCCAGCATCAGCAGACTGTCCGTCAACTTAAAGGCATTGTAGGGTGCCCAGCAGATCAGGAAGATGGCCACCAGGGAGATGATGAGCCTGAGGGATCGCTTCTTCTGTCGCCGTGAGCTGGTGCTGCAGAGCGCCCGGAAGATGCGGATGTAGCAGTAGAGCATGACCAGTAATGGGAGTCCAAAGCCTAAGGTCAGGTTTAGAAGCTGCATAGTTAGCTGCCATTTCAAATGGGTTCCTGGGGTAAACTGCACAAAGCACACCTTCGAGCCGTCGCTTGGCAGTGTAGTCACAGTCCGGAAATGGATATCCACCGCGGACAGGCCCAAGCAGCAGACCCAAATGACCGCGCAGGTCACCTGGGCCAGGCAGGTGTTGCGTCTCCAGCCGGTTTGGACAGCATGGACAATGGCTAGGTAGCGGTCGAAGCTGATGCAGGCTAGGAAGAGCACTCCGCAGTAAATGTTTAGGGAAAATAGCGCTCCCACTATCTTACACATCGCAACGCCAAACACCCACCCTTTGATCCACTGGATAGCAAACAAAGGAAGGATAATTGCCAGCAGGAGGTCAGAGATAGCCAGGTGCAGCAGGAATGTGTCGGTGAGGGAGTACGAGCACGGCGAGTGGCGGGATCGCCTGTAGCGACGGACCACGTGCACCACCAGCACATTCCCCACAAAGGCCAAAAAGAAGATAATGAAGTAGGCAGGCGGAGCAAAGCTGCGGAAAAAACGCCATGTCTCTCTTATTGGGCAAGGGGCCG
>TU133264
GTACTGTAACATCCCAAAAAATATTGAGCTGCTATTGTGATATCACACAGAAATATTGAGTTGTAATATCACAAACAAGAACTGATACTGGGACATCACAAAACAAATACGGTGCTGTTATCTTAAtatcacacacaaatacatgtttaaaacatgttttaatttttacatgAGGAGGGGAACCCAAACCTGTTATCTGAGCTCTAGCTGTGGAACAGCTAAATTAACTTATTTAATATCACAGAAATTAATCATTTCTTTATTAAGAAAGCTCAAAAACTGTACAATACACACTTATGTATCACAGTAATAGAAATAACGGTATTTTAATGGAAACAGGATCATTTCCCCTGAAAACCGAGAGCTGTctctgtttactgtttttttattcctcCAATTTTCAGACAAAGAAGCAGAAGAACACTTGGAAAAACTGAtgactaaagttttttttttttctggtggcGTCTGTTGATATTAAAAGAAGAAGGGAGAAGAACGAGTCCTGCTCAGCTTGGGAGCAATTTTAGTTCCTCATTAATACCTCAGAACCCACAGCATGTCTTTACCAGAACTTCAACCAATTAGTGAAGAAAAACAACCACAATACTGTCATGGGACTAACAGTAGAAATAATCAACAATATGTAAAGGTCTTAAAAACTTCATTAAGCTTCTGTAATAATAAGCAAACAAGCATTTTCCAACTGATATTTTgtacaaaactttaaaaaaatgagagcaACTTGGTTTTGACTTTGttaaagtatgacaaaaaaagtactaaagtattttttttattaacacacaTTTGGGACAGATAAGCCTAGTCTCTTTGTAGACAATCAATCTGGCAGTATTAACAtagaaagcataaaaaaaaatctttactttgcagaatagttttaattcagccacatttgAGGGGTTTTGAGCATGAATGGCCTGTTTAAGATCAGTGGACCTGCTGGTGAGcttcaggtcattgtcctgttgcagaacacaagtacgcctgagcttaaggtcacaaactgatggatgGACATTTTCCTTCGggattttttgtttatgtttacagGTTTCTTTATCCTCAATTTTTTGCTCTGGCTGATAAAACGTCTCTCTTCAGACAGAGAAGCAGAAGAACACTTGGAAAAACTGATGACTAAAGTTGTTCTTGTGGCGTCTGTAGATATTAAAAGAAGAAGGGAGAAGAACGAGTCCTGCTCAGCCTGGGAGCAATTTCAGTTCCTCATTAATACCTCAGAACCCTCAGCACGCCTTTGGGTGATTCAATGTCTTTACCAGAACTTCAACCAAGGGAGAACTTTCAATAAGAAATTAGTGGAGAACAACAACCACAATACTGCCATGTGACTAACGGtagaaataaacaacaatttgTAAAAGTCATACTTCAATAAGCTGCTGTTATAATAAGCAAAAAAGCATTTTCCAACTGATTTTTGgtacaaaactttaaaaaatgagagTAACTTTGGTTTGACTTTGTaaaagtataacaaaaaaaaggtataaagcttgttttattattaacacaCTATTGAGACTGATTAGCATAGCCTCTTTGTATAGACAATAAATCTTGCCGTATTAACACAGGAAGTACAGAAAGTACTTTACTGGCACACACAACCAACCCAGCCTCTGACACAATCCTCTCCCACAGGCCCAGTGACAGTTGGCACCACTATGCCACAGCACAATTTCACAACCAGGGGAAATGTAACTGTAGAAATAGAGCATGTCAAGCAGAGTTGATAAAATGATTGGGACCAATCAGAGTCAAGGGAAGGTCTCAAAACTACAGTCAGTGAGCCATCTTGCAATAACTGTAATGGTCGTTACGACCAACCACAGTCTGGGAAACATGATTGTAGCAATAGAGcatgttcagaaaaaaaagacaaagattaGGACCAATCAGAGTCAAGGGAAGGTCTCAAACCTACTGATTTGCTGGGTAGGACCAATTACAGTCAGTGAGCCATCTCGAAATAACTGTCATGATCATTAAAACCAAGTCTGGAAAACATAAATGTACCAATAAAGCTTATCCAGCAGAAGATATACAATGATTATATTAGAAAACTCAGTCATTTCAATACTGTATTAGATTACTGTTAAATAGAGCATGACCATCAAAAGAGACCAATCAGGGTCAAGGGGAGGTCTTAAAATAATCACACGATGTACAGGACCAGTTGTGGTCGGCGGAGCTCTCAAAACAACTCATGTGTTGGGTGAGACCAATTATAAATCAGTGAGACATATTTAAACTTCTGTTTTGGACTTCTGGGGAATATAGATGTAGTAATAGGGCATGTCCAGTAGAAAGGATAGAATGATTCAAACCAATCAGAGTTAAGGTGAAGTCtcaaaactacttttttttttaagtaggaCCAAATACAAATCTCAAAATAACTGTCATGGTATTTTTGACCAACCAAAGTGAATGTAGAAATAGAGCCTGTCCAGCAAAAGAGATACAATGATTAGGACCAATCAGAGTCAATGGACATGAATGGACATAGCCATTAGGACTTGTAATAGTCTGTAAAATTTGGATGTAGCAATAGAGCATGGCCAGCAAAGGGAAAACAATGATTGGACCAATCAGGGTTAACAGGAGGTCTTAAAACAACTGATTTGATGGGTACCACCAATTGAAAGGTAGCACATCAACTGATGGGTTAGAAAGGACCAATTCCAGTGAGAGTGACATCTTAAAACAGTTGATATTGTCGTTAGGACCAATTACAGTCTGGAAAATGTGACATAGCAATTAAGCATCAGAGTCAATGGAAGGTCTTACACAAATCACTTGATGAACAATGATTAAGCAATTGCAACTGACATGATGGTTCGGACCAATCAAAGTCAGTAAGAGATGATGAGAATGTCTGGCATTCACCTTAGCTTTGGGCGTATCCATATATGTCCAGCTTttgccttaattttttttttttttaatcagttttagcTCATAACTGAGAAGTAGGAGGTGTTCTCGCCTTCAGAGCTGAAAGACATGGTTGTCCTGCGGCTTGATCCTTGACTGTGCAGCTCTCTGGCCAAGCCGAAGCTCCCCAGCCACACCTTACACATCTGGACCAGCTCACGGCGGAACTTGACGCCAACAAGACCATAAAGCAACGGGTTGAGGGCGCAGTGCAACAGTCCCAGGCTCTCTGTGACAAGGATGCCAATGTCCAGCGCCTTTTCCAAATCACAGCTGCGAAGTAGCCATTCCAGCATCAGCAGACTGTCCGTCAACTTAAAGGCATTGTAGGGTGCCCAGCAGATCAGGAAGATGGCCACCAGGGAGATGATGAGCCTGAGGGATCGCTTCTTCTGTCGCCGTGAGCTGGTGCTGCAGAGCGCCCGGAAGATGCGGATGTAGCAGTAGAGCATGACCAGTAATGGGAGTCCAAAGCCTAAGGTCAGGTTTAGAAGCTGCATAGTTAGCTGCCATTTCAAATGGGTTCCTGGGGTAAACTGCACAAAGCACACCTTCGAGCCGTCGCTTGGCAGTGTAGTCACAGTCCGGAAATGGATATCCACCGCGGACAGGCCCAAGCAGCAGACCCAAATGACCGCGCAGGTCACCTGGGCCAGGCAGGTGTTGCGTCTCCAGCCGGTTTGGACAGCATGGACAATGGCTAGGTAGCGGTCGAAGCTGATGCAGGCTAGGAAGAGCACTCCGCAGTAAATGTTTAGGGAAAATAGCGCTCCCACTATCTTACACATCGCAACGCCAAACACCCACCCTTTGATCCACTGGATAGCAAACAAAGGAAGGATAATTGCCAGCAGGAGGTCAGAGATAGCCAGGTGCAGCAGGAATGTGTCGGTGAGGGAGTACGAGCACGGCGAGTGGCGGGATCGCCTGTAGCGACGGACCACGTGCACCACCAGCACATTCCCCACAAAGGCCAAAAAGAAGATAATGAAGTAGGCAGGCGGAGCAAAGCTGCGGAAAAAACGCCATGTCTCTCTTATTGGGCAAGGGGCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133263 False 2352 TUCP 0.45 2 9997712 10002046
TU133264 True 4039 lncRNA 0.41 2 9996204 10002046

Neighbor

gene id symbol gene type direction distance location
cxcr3 NA coding upstream 37220 9948259 ~ 9958984 (+)
LOC103041570 NA coding upstream 85827 9864750 ~ 9910377 (+)
LOC103042078 NA coding upstream 135895 9832976 ~ 9860309 (+)
lag3 NA coding upstream 164827 9806778 ~ 9831377 (+)
usp5 usp5 coding upstream 195467 9777089 ~ 9800737 (+)
LOC103040655 LOC103040655,LOC108266557,LOC108432293 coding downstream 18592 10020638 ~ 10025268 (+)
LOC103040337 NA coding downstream 25348 10027394 ~ 10034268 (+)
pafah1b3 pafah1b3,LOC108432331,LOC107671211,LOC107755833,LOC108266541 coding downstream 39867 10041913 ~ 10047971 (+)
cic cic coding downstream 377183 10379229 ~ 10451391 (+)
gsk3a gsk3a,gsk3ab,LOC103362704,LOC107724158,LOC108412552 coding downstream 467129 10469175 ~ 10488569 (+)
G98798 NA non-coding upstream 225006 9770433 ~ 9771198 (+)
G98795 p3h3,LOC107700158,LOC107724912 non-coding upstream 231579 9754221 ~ 9764625 (+)
G98772 NA non-coding upstream 244494 9751178 ~ 9751710 (+)
LOC111193448 NA non-coding upstream 259725 9725074 ~ 9736479 (+)
G98689 NA non-coding upstream 469763 9526155 ~ 9526441 (+)
G98841 NA non-coding downstream 47432 10049478 ~ 10053331 (+)
G98935 NA non-coding downstream 172682 10174728 ~ 10175861 (+)
G98938 NA non-coding downstream 181352 10183398 ~ 10197911 (+)
G98954 znf574,LOC108412555,LOC107717428,LOC107700188,LOC107551698 non-coding downstream 344441 10346487 ~ 10348593 (+)
G98969 NA non-coding downstream 451196 10453242 ~ 10455166 (+)
G98636 NA other upstream 683401 9312406 ~ 9312803 (+)
G97931 NA other upstream 2865395 7127804 ~ 7130809 (+)
G97926 NA other upstream 2926075 7068688 ~ 7070129 (+)
apoc1 NA other upstream 2930175 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 3314513 6654350 ~ 6681691 (+)
G98845 NA other downstream 58387 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 170507 10172553 ~ 10178459 (+)
G98967 NA other downstream 491745 10493791 ~ 10498518 (+)
LOC103033199 NA other downstream 997879 10999925 ~ 11027424 (+)
abhd16a abhd16a,LOC107717442,LOC107723554,LOC107582042 other downstream 1026776 11028822 ~ 11047690 (+)

Expression


Co-expression Network