G98845


Basic Information

Item Value
gene id G98845
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 10060433 ~ 10069002 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU133280
TTCAGTGCAGTTCTGTCTCACTCTGTGTTTACTCTGTTAAATCTGTCTGAAATTTTTCTCTAAAAAACTCTTAGAGAAGATGAGGTTCCTGATGTTTCTGCTGCTCTTCACTCTCATGGTGGGCTTCAATGTTCTTCAGTGCAGAGAAGTTGTTGATGTGCAGCTGACTGGTGCAGATGCACCAAAACCTGGAGACGTGATAAAGTCAGCTGGTGTCAGGACCCACAGGCATCAGAGGAAACCATGTGTCTGCAGTGgtGCAAATAAAAGTCAGTGCTGCAAGTCACAGAagaaacTCTCTGATTTGGAGAAGAATCAATGCGGAAAGAAAGGGATTTACAACtatggaaaatgcaaaatgtTCCTCAGGAGGATGAATTCCAAGGCCCCCAGTACCCCAATTTAATTTCAACAAAATCCCTGTAAAAATGTGCTGTTCACAGTATTATATCATCTCTCATTTACTGGAGCTTCGTGATGCTTATTGTGTTTAGAAGAGAAGATGCAGACCTTTTTCGTCTGtctttcattttctccaaaAAATAGTATTCAGTTCTGGTTCCTTCATTAAGTAAAACtgatgtatatatacatatatataaaacacacacacacacacacacatagtactgtgtaaatgttttaggcacctgtgacaaatttaaatgagaaatattCTTATCTGGGCAGaaaatgtttattagctcagttttaacagtaatattacaataaatacaagtaaGATTCATACAAAAAGTGGTGATTTTACATCAATCTGTTCATTAAAACTAACAGTGCTAATTCTGCTATTGAATTTATCTTATGATTTTGCTTAAAAGTTTCTGAACCCCTTAGAATTGAACTTCTCGCTTCAGGTCCTTCCACAACATGCAGATTGGATTAAATTCAGGACTTTAAGTCTGCCCTgttccaaaacattaactttattcttctttaaccATGGTTTGGGTCATTGCCTTGCTACATGACCCACCTTTtcttgagattcagttcatAGACAGATGTCCTCATATTTTCATTCAAAATTCTCATGAAATAATTAAGAATTCATTGTTCCATCAATGAAGGCAAGCCATTCTAGCCCAGATGCAtcaaaacaggcccaaaccatgatactaccaccaccatgtttcacagatgggataagGTTCTTATGctgaaatgcagtgttttccattATTTAATGGTTTGTGGTGATGTGTTTAGTTgctcttgtatttttttcatgtgtGAAAAGAAACCAAACCAATGGGGGTGTGAGGAAACACTCCAAATGAATAAACTCGTTAACTAATTCGGACCTAAGAAACAAACTCAAActtagtgttttatttaattttaccctCTTTCTAATGTGATCTAAATCttctgcacagtactgtatatcaaGTGTATATCAAATCTGTGGTATATATTCAATTTTCATTCTCATAACTATGATAACAAAATCAATATCTTACTTAATGGATCAGTATTGATCTCTGTGTAACttctaatatataaataaacaagattTTTCTATA

Function

NR:

description
PREDICTED: ewing's tumor-associated antigen 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133280 True 1544 TUCP 0.35 5 10060433 10069002

Neighbor

gene id symbol gene type direction distance location
pafah1b3 pafah1b3,LOC108432331,LOC107671211,LOC107755833,LOC108266541 coding upstream 12462 10041913 ~ 10047971 (+)
LOC103040337 NA coding upstream 26165 10027394 ~ 10034268 (+)
LOC103040655 LOC103040655,LOC108266557,LOC108432293 coding upstream 35165 10020638 ~ 10025268 (+)
cxcr3 NA coding upstream 101449 9948259 ~ 9958984 (+)
LOC103041570 NA coding upstream 150056 9864750 ~ 9910377 (+)
cic cic coding downstream 310227 10379229 ~ 10451391 (+)
gsk3a gsk3a,gsk3ab,LOC103362704,LOC107724158,LOC108412552 coding downstream 400173 10469175 ~ 10488569 (+)
rabac1 rabac1,LOC107551691,LOC107582040 coding downstream 702496 10771498 ~ 10778123 (+)
LOC103032145 LOC108438260 coding downstream 1010533 11079535 ~ 11101099 (+)
zfat zfat coding downstream 1043053 11112055 ~ 11127909 (+)
G98841 NA non-coding upstream 7102 10049478 ~ 10053331 (+)
G98829 LOC103025791 non-coding upstream 33082 9968591 ~ 10027351 (+)
G98831 NA non-coding upstream 56569 9947394 ~ 10003864 (+)
G98798 NA non-coding upstream 289235 9770433 ~ 9771198 (+)
G98795 p3h3,LOC107700158,LOC107724912 non-coding upstream 295808 9754221 ~ 9764625 (+)
G98935 NA non-coding downstream 105726 10174728 ~ 10175861 (+)
G98938 NA non-coding downstream 114396 10183398 ~ 10197911 (+)
G98954 znf574,LOC108412555,LOC107717428,LOC107700188,LOC107551698 non-coding downstream 277485 10346487 ~ 10348593 (+)
G98969 NA non-coding downstream 384240 10453242 ~ 10455166 (+)
G98966 erf non-coding downstream 434949 10503951 ~ 10510431 (+)
G98840 NA other upstream 58387 9996204 ~ 10002046 (+)
G98636 NA other upstream 747630 9312406 ~ 9312803 (+)
G97931 NA other upstream 2929624 7127804 ~ 7130809 (+)
G97926 NA other upstream 2990304 7068688 ~ 7070129 (+)
apoc1 NA other upstream 2994404 7062132 ~ 7066029 (+)
G98934 grik5,LOC107551699 other downstream 103551 10172553 ~ 10178459 (+)
G98967 NA other downstream 424789 10493791 ~ 10498518 (+)
LOC103033199 NA other downstream 930923 10999925 ~ 11027424 (+)
abhd16a abhd16a,LOC107717442,LOC107723554,LOC107582042 other downstream 959820 11028822 ~ 11047690 (+)
LOC111188200 rusc1 other downstream 1225090 11294092 ~ 11302885 (+)

Expression


Co-expression Network