tbc1d31 (tbc1d31)


Basic Information

Item Value
gene id tbc1d31
gene name tbc1d31
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8482729 ~ 8507085 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674268.1
TGCGCATTGTTTTAAATGCGGCCGGTAGCAGAGATTCCCCAGATCAGTAAAGAGAGAAGAGTTTACAGGTTTTTGCAGCAGGAACAGTCCTAAAGTTACAGTAAATCAGTAAACAGGCGACTTTAAAGCCTCAGTTTGACTGTACGCGGTGTAAATGTAGTTTAATAGAGGATTAGCTCGTTAGTTTGGGCTTCAGTATAATGTAGCTCGGCTGTAACGGcggttctgctgctgctgctgttgctgttggTAACCGGTTTGGTGAATGTGGAGATTTAGCAGCTGAACCTGAACCAGTAACGTTAAACTGCGGACATGCAAACCACAGATATAAGCAGCAAAGAAAGTGGAAAATTATGGTATCGGAAGCCTGTGATATCTAATAACGGCATCGTGGTGAATGTGATTCGCAGTGCAGCTTATCAGAACAAGACTGTGCGTTTCCTTCAGGTGACGTTTGACACGACCGGGGAGTCATTCCTTGCTGGGGATCATCATGGGCATATCTGTTTGTTTGATATTGGCGCAAACAGATTTAAGCTGCTTCAGAAAACAGGGCAAGCAGTTACTGCCTTGGCCTTCAATCTGCGCAGAACAACTGAGTACCTGGTCGCCCTTTCtgattattccatcaaatgcTTTGATAAAGACACCAAGCAGTTGGTGAGCTGGATGAGGGGCCACGAGGGCGCGGTGTCCTCCCTCTCAGTTCACAGTTCTGGACGCTACGCCATCAGCACCTCCTTCGACACGGCTCAGCTGTGGGATCTAGACACCTTTCAGAGGAGGAGGAAACTGAACGTGCGGCAGTCTGTGGGAATACAAAAGGTGATCTTTCTGCCGCTGAGTAATACCATTCTAAGCTGCTTCACTGATGATTCCATCTTTGCCTGGGAGAGCGACTCGCTATTCTGCAAGTATCAACTTCCTGTCCCGCAGGATGGACCCAGAATGCACTACAAGGCTTTTGCTGTCACACAAGATGGAAAGACTCTGGCTGCAGGCGGACGCTCGAATTTGATCCACTTGTGGTGTTTGGAGAGCCAGCAGCTCTTCAGAGTTCTACAGATGCCTCCACAAGTGAGGACCGTGAGACATCTCGACTTCTTACCAGACAGCTTTGATGGAGGATCCAGTCAGatccTGGGTGTTTTGAGTCAGGATGGCATCATGCGCTTTATCAACATCCAAACGTGCAAGCAGCTCTTTGATGTCGGTTCCCAGGACGACGCTATCTCCTCGGCTGCTGTTTGTCCTAAAGGCCGCCACATCGTTGCCATCATGGACAACGGAGCTCTAAGAATCTACAACGTCCAGTCTCTCACTCAAGAGATCAACAAGCCTCCACAGCCCTTGGTGAAAGTGGTGACCACGGACAAGCGAGGTGACAGTTCCTGCTTAAAAATGAAGGTTCATACAGGAGCAGTTCCCCGTCCAGCCAGAGCATCCGGCCGCAGAATTCAGACCAAACGTCTGCCATCCACAACTGTTTCCACGCTAGAGGACAAAGAGAATGATGTACCAGATGCCTTGAGTAAGAAACGACTACGAACGTTACTGAAAGCTTTTGGAGAATATCCAGAAAAATACAGgATGTTTATCTGGCGCTCTCTGTTGCGGCTGCCTGAGAACCACGCTGCTTATAACAGCCTGACTAATAAAGGAGTCCACTCAGCTTTCCTCTGCCTGCAGGAGCGCTACCCCATCAAGAGTCACAGGCTTCAGAGAGGACTGCAGAGAGTTCTCTCTGCTCTCGCTCACTGGTCTTCCATCTTTGGTGAGGCTGAGTATCTCCCTCTAGTGGCTTTTCCGTTTGTGAAGCTTTTCCAGAACAACCCGCTCATCTGTTTTGAAGTAGTGGCCACAGTTATTGTGAACTGGTGCCAGCATTGGTTTGAGTACTTCCCAAACCCTCCTCTCAATGTTCTAAGCATGGTGGAGAACGTGTTGGCGCATCACGACAAAAAACTCCTGCAGCACTTTGTCAACTGTGGTGTCACTTCCCAGCTCTATGCGTGGCCCCTGCTGGAGACCCTGTTCTCGGAGGTGCTGACCAGAGAGGAGTGGCTGAAGCTGTTTGATAATGTTTTTTCCTACCACCCTTCTTTCCTCCTGATGGCCGCTGTGGCGTATGTGACGTGCTGCAGAGCGCCGTTACTACTCTGTACTCAACGAGAGGACTTTGAGTACTTTTTCCATCATCGCAACAACCTGGACATAAGCGCCATGCTGAAAGAGGCACATCGATTAATGGAAACGACCCCACCCGACCTGCATCCGAACTCCATGCTGAGTGACTTTGAGCCGCTGACACACGGACAGTACCCCATCTTCAACAAGTATCCCACCTTCATAGTGGAGTATCAGAGCCAGGAGCGCGAGCGCATCCGCCAGCAGGAGCTGGAATACCTCAGAGAGAGacaggtGCTTCAGGACATGCGTGCTGAGAGGGTgaggcagcaggctgaagatgAGGCCTGGTACACACAGCAGGAGCTGCTGCAGCAGGCTGAGGAACAGCGCAGGAGAATCCTGCAGCAAGAGGAGAACAAACTCACTGAACAGAGAACCAGGCTGGCTGCTATGAAGCGTGAGCTGAAGGTGAAGGAGCTCACGCTGCTGGATGCTGCCAGGAGACGCTTCCTCAAACATCAGCAGGACCAGCGCAGGATCGAGCTCAACCGCCTGGCCGATCAGATCCAGAGAAAGACGACACTGAGAGAGCAGGAGATGGCTGCAGCTGTGCAGCATGTAGAAGTGAGACAAATGGAGCTGGACGCTCAGAGAAGACTGTTCGAGCAGCAACTGGAAAAAGAGCAGGAGCGCGTGAGCCAGGAGGTGAGGGCTGAGGTGGACACCTGGCAGAGAAAGGCAGAAGCAGAGAGCTCTACCTTTCAAACCCTCCTTCAGACAGAGAGTGACCTCAGCCAGGAGACCAAAAGGGTACGTCTCCCTCTGTATCAACAGCACCAGTCCACCAGTCATTTTCcactgctgagaagcgttggacacgttcaggTGGTGGAGGAGTCTCTAGCAGAGGCGGGGCAGCAGGAAGTGGACGCCGACTGGCAGAGAGAAGTGATTGGGCGGCTGGAGGAGGCGGATGAGGAGCAGGAGAGGCGGAGACAGCGATTGGCTGAGCTCAGCAGAGAGACGCGTGAGAAGGAGGAGCAGCTGGTGCAGCTGATGGTTGAAGTACAGGGAAAGCATTGGGATGATGTGGTGGCTAAGCGAGGACAGCTGGAAGAGGAAAAGTGTACGGCTGCTGCTGCAGAAGCCCAGCGGAGATTACATCACTCCCAGCATGCAGATGAAATCATCCAGCACCAGGAGAGGCTGAGGCGGAGTCAAGAAGAGTCAGATAGTCATATAAAGGAGAAGAAGCTCAGCCCTCCCTGCTCAACTCGAGCACTTTTGCACAAGCCTATCAGCACACAAGCAGAGACCACCAGTATCTGTCTGAACAACCGCTCTTCCTCAGATACCTCTACCTgctTTTCTCTAGATCGGGGTCGAGATAAACTGGACCGTGAGGAGAGGGAGCTGCTGCAGGAGGTGAGAGAGCTCCGGCAGAAACTCACCGCCAGAAGAAGAGCTGCAGATTGGACCTCACAATCAGTTAGCTCACAACAATCCTAGTGAACA
>XM_022674270.1
TGCGCATTGTTTTAAATGCGGCCGGTAGCAGAGATTCCCCAGATCAGTAAAGAGAGAAGAGTTTACAGGTTTTTGCAGCAGGAACAGTCCTAAAGTTACAGTAAATCAGTAAACAGGCGACTTTAAAGCCTCAGTTTGACTGTACGCGGTGTAAATGTAGTTTAATAGAGGATTAGCTCGTTAGTTTGGGCTTCAGTATAATGTAGCTCGGCTGTAACGGcggttctgctgctgctgctgttgctgttggTAACCGGTTTGGTGAATGTGGAGATTTAGCAGCTGAACCTGAACCAGTAACGTTAAACTGCGGACATGCAAACCACAGATATAAGCAGCAAAGAAAGTGGAAAATTATGGTATCGGAAGCCTGTGATATCTAATAACGGCATCGTGGTGAATGTGATTCGCAGTGCAGCTTATCAGAACAAGACTGTGCGTTTCCTTCAGGTGACGTTTGACACGACCGGGGAGTCATTCCTTGCTGGGGATCATCATGGGCATATCTGTTTGTTTGATATTGGCGCAAACAGATTTAAGCTGCTTCAGAAAACAGGGCAAGCAGTTACTGCCTTGGCCTTCAATCTGCGCAGAACAACTGAGTACCTGGTCGCCCTTTCtgattattccatcaaatgcTTTGATAAAGACACCAAGCAGTTGGTGAGCTGGATGAGGGGCCACGAGGGCGCGGTGTCCTCCCTCTCAGTTCACAGTTCTGGACGCTACGCCATCAGCACCTCCTTCGACACGGCTCAGCTGTGGGATCTAGACACCTTTCAGAGGAGGAGGAAACTGAACGTGCGGCAGTCTGTGGGAATACAAAAGGTGATCTTTCTGCCGCTGAGTAATACCATTCTAAGCTGCTTCACTGATGATTCCATCTTTGCCTGGGAGAGCGACTCGCTATTCTGCAAGTATCAACTTCCTGTCCCGCAGGATGGACCCAGAATGCACTACAAGGCTTTTGCTGTCACACAAGATGGAAAGACTCTGGCTGCAGGCGGACGCTCGAATTTGATCCACTTGTGGTGTTTGGAGAGCCAGCAGCTCTTCAGAGTTCTACAGATGCCTCCACAAGTGAGGACCGTGAGACATCTCGACTTCTTACCAGACAGCTTTGATGGAGGATCCAGTCAGatccTGGGTGTTTTGAGTCAGGATGGCATCATGCGCTTTATCAACATCCAAACGTGCAAGCAGCTCTTTGATGTCGGTTCCCAGGACGACGCTATCTCCTCGGCTGCTGTTTGTCCTAAAGGCCGCCACATCGTTGCCATCATGGACAACGGAGCTCTAAGAATCTACAACGTCCAGTCTCTCACTCAAGAGATCAACAAGCCTCCACAGCCCTTGGTGAAAGTGGTGACCACGGACAAGCGAGGTGACAGTTCCTGCTTAAAAATGAAGGTTCATACAGGAGCAGTTCCCCGTCCAGCCAGAGCATCCGGCCGCAGAATTCAGACCAAACGTCTGCCATCCACAACTGTTTCCACGCTAGAGGACAAAGAGAATGATGTACCAGATGCCTTGAGTAAGAAACGACTACGAACGTTACTGAAAGCTTTTGGAGAATATCCAGAAAAATACAGgATGTTTATCTGGCGCTCTCTGTTGCGGCTGCCTGAGAACCACGCTGCTTATAACAGCCTGACTAATAAAGGAGTCCACTCAGCTTTCCTCTGCCTGCAGGAGCGCTACCCCATCAAGAGTCACAGGCTTCAGAGAGGACTGCAGAGAGTTCTCTCTGCTCTCGCTCACTGGTCTTCCATCTTTGGTGAGGCTGAGTATCTCCCTCTAGTGGCTTTTCCGTTTGTGAAGCTTTTCCAGAACAACCCGCTCATCTGTTTTGAAGTAGTGGCCACAGTTATTGTGAACTGGTGCCAGCATTGGTTTGAGTACTTCCCAAACCCTCCTCTCAATGTTCTAAGCATGGTGGAGAACGTGTTGGCGCATCACGACAAAAAACTCCTGCAGCACTTTGTCAACTGTGGTGTCACTTCCCAGCTCTATGCGTGGCCCCTGCTGGAGACCCTGTTCTCGGAGGTGCTGACCAGAGAGGAGTGGCTGAAGCTGTTTGATAATGTTTTTTCCTACCACCCTTCTTTCCTCCTGATGGCCGCTGTGGCGTATGTGACGTGCTGCAGAGCGCCGTTACTACTCTGTACTCAACGAGAGGACTTTGAGTACTTTTTCCATCATCGCAACAACCTGGACATAAGCGCCATGCTGAAAGAGGCACATCGATTAATGGAAACGACCCCACCCGACCTGCATCCGAACTCCATGCTGAGTGACTTTGAGCCGCTGACACACGGACAGTACCCCATCTTCAACAAGTATCCCACCTTCATAGTGGAGTATCAGAGCCAGGAGCGCGAGCGCATCCGCCAGCAGGAGCTGGAATACCTCAGAGAGAGacaggtGCTTCAGGACATGCGTGCTGAGAGGGTgaggcagcaggctgaagatgAGGCCTGGTACACACAGCAGGAGCTGCTGCAGCAGGCTGAGGAACAGCGCAGGAGAATCCTGCAGCAAGAGGAGAACAAACTCACTGAACAGAGAACCAGGCTGGCTGCTATGAAGCGTGAGCTGAAGGTGAAGGAGCTCACGCTGCTGGATGCTGCCAGGAGACGCTTCCTCAAACATCAGCAGGACCAGCGCAGGATCGAGCTCAACCGCCTGGCCGATCAGATCCAGAGAAAGACGACACTGAGAGAGCAGGAGATGGCTGCAGCTGTGCAGCATGTAGAAGTGAGACAAATGGAGCTGGACGCTCAGAGAAGACTGTTCGAGCAGCAACTGGAAAAAGAGCAGGAGCGCGTGAGCCAGGAGGTGAGGGCTGAGGTGGACACCTGGCAGAGAAAGGCAGAAGCAGAGAGCTCTACCTTTCAAACCCTCCTTCAGACAGAGAGTGACCTCAGCCAGGAGACCAAAAGGgTGGTGGAGGAGTCTCTAGCAGAGGCGGGGCAGCAGGAAGTGGACGCCGACTGGCAGAGAGAAGTGATTGGGCGGCTGGAGGAGGCGGATGAGGAGCAGGAGAGGCGGAGACAGCGATTGGCTGAGCTCAGCAGAGAGACGCGTGAGAAGGAGGAGCAGCTGGTGCAGCTGATGGTTGAAGTACAGGGAAAGCATTGGGATGATGTGGTGGCTAAGCGAGGACAGCTGGAAGAGGAAAAGTGTACGGCTGCTGCTGCAGAAGCCCAGCGGAGATTACATCACTCCCAGCATGCAGATGAAATCATCCAGCACCAGGAGAGGCTGAGGCGGAGTCAAGAAGAGTCAGATAGTCATATAAAGGAGAAGAAGCTCAGCCCTCCCTGCTCAACTCGAGCACTTTTGCACAAGCCTATCAGCACACAAGCAGAGACCACCAGTATCTGTCTGAACAACCGCTCTTCCTCAGATACCTCTACCTgctTTTCTCTAGATCGGGGTCGAGATAAACTGGACCGTGAGGAGAGGGAGCTGCTGCAGGAGGTGAGAGAGCTCCGGCAGAAACTCACCGCCAGAAGAAGAGCTGCAGATTGGACCTCACAATCAGTTAGCTCACAACAATCCTAGTGAACA

Function

symbol description
tbc1d31 Predicted to be active in centrosome. Orthologous to human TBC1D31 (TBC1 domain family member 31).

NR:

description
TBC1 domain family member 31-like

GO:      GO:0005097,GO:0032313

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674268.1 True 3648 mRNA 0.52 22 8482729 8507085
XM_022674270.1 False 3573 mRNA 0.52 22 8482729 8507085

Neighbor

gene id symbol gene type direction distance location
LOC103027501 NA coding upstream 868 8476853 ~ 8481861 (+)
fbxo32 fbxo32,LOC107714740,LOC107723524,LOC107657681 coding upstream 24409 8443934 ~ 8458320 (+)
LOC103026621 klhl38,LOC108429983 coding upstream 49436 8428520 ~ 8433293 (+)
tyrobp tyrobp coding upstream 118116 8358553 ~ 8364613 (+)
LOC103025484 NA coding upstream 147374 8321393 ~ 8335355 (+)
LOC103021731 LOC108438272 coding downstream 6978 8514063 ~ 8527357 (+)
LOC103028148 tomm40,LOC108438269,LOC107723430,LOC108272680,LOC107699493,LOC107657699 coding downstream 83940 8591025 ~ 8600712 (+)
derl1 derl1,LOC107714924,LOC107699495,LOC107595682,LOC107736822,LOC107657695 coding downstream 100486 8607571 ~ 8621340 (+)
LOC111193442 LOC108438282 coding downstream 141868 8648953 ~ 8660268 (+)
LOC103029611 LOC108443721 coding downstream 181187 8688272 ~ 8700977 (+)
G98270 NA non-coding upstream 43346 8439029 ~ 8439383 (+)
G98266 NA non-coding upstream 76160 8404421 ~ 8406569 (+)
G98259 NA non-coding upstream 85076 8397297 ~ 8397653 (+)
G98256 NA non-coding upstream 101640 8380880 ~ 8381089 (+)
G98255 NA non-coding upstream 107787 8374634 ~ 8374942 (+)
G98281 NA non-coding downstream 32916 8540001 ~ 8540507 (+)
G98282 NA non-coding downstream 34241 8541326 ~ 8542429 (+)
G98283 NA non-coding downstream 44978 8552063 ~ 8552380 (+)
G98286 NA non-coding downstream 72144 8579229 ~ 8579462 (+)
G98287 NA non-coding downstream 73488 8580573 ~ 8580930 (+)
G97931 NA other upstream 1351920 7127804 ~ 7130809 (+)
G97926 NA other upstream 1412600 7068688 ~ 7070129 (+)
apoc1 NA other upstream 1416700 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 1801038 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 1917726 6532516 ~ 6565003 (+)
G98636 NA other downstream 805321 9312406 ~ 9312803 (+)
G98840 NA other downstream 1489119 9996204 ~ 10002046 (+)
G98845 NA other downstream 1553348 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 1665468 10172553 ~ 10178459 (+)
G98967 NA other downstream 1986706 10493791 ~ 10498518 (+)

Expression


Co-expression Network