Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111193448 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035907.1 |
| NCBI id | CM008310.1 |
| chromosome length | 11650534 |
| location | 9725074 ~ 9736479 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002650535.1 | False | 366 | lncRNA | 0.55 | 4 | 9725074 | 9736479 |
| XR_002650536.1 | True | 390 | lncRNA | 0.55 | 4 | 9725074 | 9736479 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdca3 | NA | coding | upstream | 5084 | 9713770 ~ 9719990 (+) |
| pex5 | pex5,LOC107598380,LOC107673032,LOC107744280,LOC107724652,LOC107549490,LOC107700196 | coding | upstream | 12612 | 9690963 ~ 9712462 (+) |
| clstn3 | clstn3,LOC107724674,LOC107700197,LOC107744281 | coding | upstream | 36893 | 9622707 ~ 9688181 (+) |
| lpcat3 | lpcat3 | coding | upstream | 104854 | 9583599 ~ 9620220 (+) |
| tpi1 | tpi1 | coding | upstream | 147011 | 9566710 ~ 9578063 (+) |
| usp5 | usp5 | coding | downstream | 40610 | 9777089 ~ 9800737 (+) |
| lag3 | NA | coding | downstream | 70299 | 9806778 ~ 9831377 (+) |
| LOC103042078 | NA | coding | downstream | 96497 | 9832976 ~ 9860309 (+) |
| LOC103041570 | NA | coding | downstream | 128271 | 9864750 ~ 9910377 (+) |
| cxcr3 | NA | coding | downstream | 211780 | 9948259 ~ 9958984 (+) |
| G98689 | NA | non-coding | upstream | 198633 | 9526155 ~ 9526441 (+) |
| G98672 | NA | non-coding | upstream | 258072 | 9438030 ~ 9467002 (+) |
| G98671 | NA | non-coding | upstream | 264177 | 9413971 ~ 9460897 (+) |
| G98663 | NA | non-coding | upstream | 342336 | 9380969 ~ 9382738 (+) |
| G98657 | NA | non-coding | upstream | 349529 | 9374856 ~ 9375545 (+) |
| G98772 | NA | non-coding | downstream | 14699 | 9751178 ~ 9751710 (+) |
| G98795 | p3h3,LOC107700158,LOC107724912 | non-coding | downstream | 17742 | 9754221 ~ 9764625 (+) |
| G98798 | NA | non-coding | downstream | 33954 | 9770433 ~ 9771198 (+) |
| G98831 | NA | non-coding | downstream | 210915 | 9947394 ~ 10003864 (+) |
| G98829 | LOC103025791 | non-coding | downstream | 232112 | 9968591 ~ 10027351 (+) |
| G98636 | NA | other | upstream | 412271 | 9312406 ~ 9312803 (+) |
| G97931 | NA | other | upstream | 2594265 | 7127804 ~ 7130809 (+) |
| G97926 | NA | other | upstream | 2654945 | 7068688 ~ 7070129 (+) |
| apoc1 | NA | other | upstream | 2659045 | 7062132 ~ 7066029 (+) |
| adar | adar,LOC107723500 | other | upstream | 3043383 | 6654350 ~ 6681691 (+) |
| G98840 | NA | other | downstream | 259725 | 9996204 ~ 10002046 (+) |
| G98845 | NA | other | downstream | 323954 | 10060433 ~ 10069002 (+) |
| G98934 | grik5,LOC107551699 | other | downstream | 436074 | 10172553 ~ 10178459 (+) |
| G98967 | NA | other | downstream | 757312 | 10493791 ~ 10498518 (+) |
| LOC103033199 | NA | other | downstream | 1263446 | 10999925 ~ 11027424 (+) |
