CI01000012_06620470_06637571


Basic Information

Item Value
gene id CI01000012_06620470_06637571
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6620060 ~ 6637689 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_06620470_06637571.mRNA
ATATATAAAGTGGACCAACAGTTTATCATAAACAAGTCGACACTGAGAAAATTGTTTTTATTGAATAGGGCTCTAGTGTGTGGCACCTTCTCTCTCTATCCCCTCCCCGCGGGCAGGAAGAAAGACTTGACCCCTTGATTTACTTCCTGCTTCTCTGAAGCTGTTGTACTCCATCACACACACACACACACACACACGCTCAAGGACAGAGCAAGAGGACTCTGCATCCACACACTCCACTTCCTGCCGTCTTTGATTCATGGCTTTCATGGCTGAATGCTTAACAACCTAACAGAGACAAGGCCGACATCGAAATAGGCCTCTTTTTTATTTTACGGTCATATGTGAATTTATAATTCCACCCATCGAATGCGTTTAGATTAAAAAGCACTTTGTTAATGAATGACCACATGTTTTTTGCGATCGCGGTGTCATTGAAGTATTCTCCTTTAAAGGTGCACTTGGTGGAGTGTATTAGTGAGTCCCACTCGGCGGTGGACAGGCGGTGTCACACTGATGTGGACGAGCTGCCCTACTTTGGAAACACAGTGAAGGGGAGAGAGGAGCTTCTGAGGCCTGGGGTAACTCAAGCACATCTCTCGCTCTGTCTCTGTTCTTTCTCTTTCGCTCTATGGGTGAAAAAGGGGGCAGTGCCAGCGGGCACATTGGGGTGTCCAGGGGAAGGGGAGGGGCCCAGCTGTAGCGCTGCTTGGGAACGCTTACTTGCTCTGAGCTCTAGAGCTCCAGCAAACCGGCATCCCCCCAGCCATTGCCTCTGTGAGAGAGAGGGGCAAGAGGGGCAGACTCACTGGGACCCCCTACTGACTCCATACTGCTGGTGCTACTATTTCAGAAAGATCATTTTAAATGGGCAGGTTATCAAGGTTTTTTCAAGTTTAAATTCTTATCAGCATCAAAAGTGGTGGCAGAGATGCAAGGTGGGAATGTGCAGTTCAGATCAGGGATTCAACGCACCCCTCAACACAAGCATTGTGTCCTGCTTTGACCTCCATATGAAAAGCATTGCAGATACGGTGTCACAAAAGGCAATTTTGCGAGCTCAAACAGGGAAAGTAGTGAAAACAAATGAAAGAGATGATGATGAATGGGAAGTCTCTGACGAGATAATTAAAGAATCCATGAAAGTGGTAGAGCTTGCACAGGCTGGCTCCAAATCTCCAGTCCACTTCCAGGTGTGTATGAGTAAGCAACGGAATAAAACAACTTCAAACTTGAATTTAAACTACAAGAAATCTCAAAATGAGACTCTGGATCTTCGTACTAACATCAAAGACCTGTGGGAGAGTGAAAGTAAAGACAGGCTCTTGCAAGAACCTGTCAAGCGTCAGTAGTTTCAAAGTGTACGTTAAGAATCCCCTTCAACCAGGACAAGAGATTCCTCAGGTAACTAAGACTTACTTCAAGGGCTCTAGAAACGTTCAAACTTCTTAACATTCTCATACTTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_06620470_06637571.mRNA True 1470 mRNA 0.46 7 6620060 6637689

Neighbor

gene id symbol gene type direction distance location
CI01000012_06441231_06476986 KIF16BB coding upstream 142956 6441192 ~ 6477104 (+)
CI01000012_06380300_06388370 ISM1 coding upstream 231069 6380300 ~ 6388991 (+)
CI01000012_06334114_06368535 SPTLC3 coding upstream 250969 6333349 ~ 6369091 (+)
CI01000012_06208439_06217101 BTBD3B, BTBD3 coding upstream 402146 6208439 ~ 6217914 (+)
CI01000012_06182472_06192196 NA coding upstream 427447 6181007 ~ 6192613 (+)
CI01000012_06651665_06682236 NA coding downstream 13899 6651588 ~ 6682700 (+)
CI01000012_06826817_06842273 NA coding downstream 188234 6825923 ~ 6842529 (+)
CI01000012_06862144_06865773 NA coding downstream 223853 6861542 ~ 6866078 (+)
CI01000012_06938165_06970627 NA coding downstream 299901 6937590 ~ 6970901 (+)
CI01000012_06990634_06991686 NA coding downstream 352945 6990634 ~ 6991848 (+)
G72760 NA non-coding upstream 58449 6557200 ~ 6561611 (+)
G72713 NA non-coding upstream 221420 6397486 ~ 6398640 (+)
G72731 NA non-coding upstream 223050 6396744 ~ 6397010 (+)
G72730 NA non-coding upstream 223357 6396397 ~ 6396703 (+)
G72757 NA non-coding downstream 436977 7074666 ~ 7087621 (+)
G73150 NA non-coding downstream 593497 7231186 ~ 7231443 (+)
G73223 NA non-coding downstream 622137 7259826 ~ 7260038 (+)
G73224 NA non-coding downstream 623171 7260860 ~ 7261065 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 695755 5922385 ~ 5929186 (+)
G71623 NA other upstream 803455 5813517 ~ 5816605 (+)
G71548 NA other upstream 1058627 5550493 ~ 5561433 (+)
G71221 NA other upstream 1079604 5538525 ~ 5540456 (+)
G71218 NA other upstream 1081676 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 1168414 7805248 ~ 7811902 (+)
G73578 NA other downstream 1729117 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 3584266 10223697 ~ 10236276 (+)
G75533 NA other downstream 4507128 11144817 ~ 11145739 (+)
G76385 NA other downstream 5993066 12630755 ~ 12675666 (+)

Expression


Co-expression Network