CI01000012_08159919_08162280


Basic Information

Item Value
gene id CI01000012_08159919_08162280
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8159607 ~ 8162336 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_08159919_08162280.mRNA
CGATAAATCTCGCAGATTTTGTCCCCCACGCCAGGCAGAATCAGTGTTGTGGAGCTAAAGACGTCTATCCCAGACAAGGTGGTGAAAGAGTCTCGAAAATCACACTGCAATTTGCTAAGTTCGGGGTCGGCTACCCCCATCCACCCTGGGATGTAGGCTAGGTCTCTAATGTGACACGTCTCCCTCAAAAATGAAACGTTTTTTAGAAATGTATAAAACATATTGTAAAGTAAAATCCAATTTGTTATGCCTAATTTGAAACCATAAACACTCATCAGTGTGTGCAAATACTCCAAGAATATTGTCAGACGCATGGCAAGTGCCTACAGTTTGCGCCCTCATTGTGGCCTCTGTCTATCAGTAAGCTTCCTTATCAATAACTGTGATTGCTCAGCTTTCATCAGTTGCGCGTTGAGCGCGCGGAGGTCATCAGTGTTTTATCTCTCGCATGTTCTCGCAGCAGAGACACGGGAAAACCCTGAAGTTCGCACAGCTGTGGTCCAGCGGTTGTGCGCTGTGAGTATTTGGTTACTCGGGGTAGAAACTCTCTCTCTGTGTCTTACTCTAGCTCTGTCTTGTGGTCCCAAAGTCAAACCGCCTCTTTATTGTAACCCAACCCGCGACGTCATACAGCCAAACCCCCAAAATACTGAAGTGAAGTTTCCTCCACTGGTACAGCAGCCCTCAACGCCAAAGGACCAAACACATGCAGACTTTTATCCCAGTATACTTGCCAGAGGACTGAACTCTACTGCAACTTTTAAAACTTTTACGGCATAAAAGGTCTTATGATATAATGGTGAGGACAGTAGAAGGAAAGAGAAAAACGAAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_08159919_08162280.mRNA True 836 mRNA 0.45 2 8159607 8162336

Neighbor

gene id symbol gene type direction distance location
CI01000012_07847662_07849170 KCNS3A coding upstream 309873 7846544 ~ 7849734 (+)
CI01000012_07822979_07844745 WDR35 coding upstream 314047 7822410 ~ 7845560 (+)
CI01000012_07817578_07821568 NA coding upstream 337584 7817578 ~ 7822023 (+)
CI01000012_07812015_07812349 BEND3 coding upstream 346954 7812015 ~ 7812653 (+)
CI01000012_07806089_07811902 BEND3 coding upstream 347705 7805248 ~ 7811902 (+)
CI01000012_08234924_08239665 NA coding downstream 72423 8234759 ~ 8239885 (+)
CI01000012_08264407_08270366 DIEXF coding downstream 101666 8264002 ~ 8270828 (+)
CI01000012_08307719_08308987 NA coding downstream 145383 8307719 ~ 8309221 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding downstream 150567 8312903 ~ 8334856 (+)
CI01000012_08353036_08355661 NA coding downstream 188493 8350829 ~ 8357504 (+)
G73522 NA non-coding upstream 6418 8152928 ~ 8153189 (+)
G73507 NA non-coding upstream 25388 8134012 ~ 8134219 (+)
G73493 NA non-coding upstream 38401 8120969 ~ 8121206 (+)
G73471 NA non-coding upstream 60488 8098708 ~ 8099119 (+)
G73465 NA non-coding upstream 67719 8091629 ~ 8091888 (+)
G73537 NA non-coding downstream 40526 8202862 ~ 8203167 (+)
G73571 NA non-coding downstream 115059 8277395 ~ 8277583 (+)
G73576 NA non-coding downstream 203267 8365603 ~ 8365925 (+)
G73579 NA non-coding downstream 206286 8368622 ~ 8369011 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2235302 5922385 ~ 5929186 (+)
G71623 NA other upstream 2343002 5813517 ~ 5816605 (+)
G71548 NA other upstream 2598174 5550493 ~ 5561433 (+)
G71221 NA other upstream 2619151 5538525 ~ 5540456 (+)
G73578 NA other downstream 204470 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 2059619 10223697 ~ 10236276 (+)
G75533 NA other downstream 2982481 11144817 ~ 11145739 (+)
G76385 NA other downstream 4468419 12630755 ~ 12675666 (+)
G76374 NA other downstream 4583195 12745531 ~ 12749169 (+)

Expression


Co-expression Network