G182501


Basic Information

Item Value
gene id G182501
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 3547633 ~ 3550413 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU247085
taGTTCATTCTGAACACGGATGCCTCGCTCTTCCTCCAGACCGGTGCCGAGAGGAGAGAAGTGAAGGGGACAGACGGtgtgaccttttgacctttccTACTGTGGGGGTGAGAACCATAACAGAGCGTGTGGCATTGACCGGTGATCCGGATGATCCGATTAATCTGAATGATCCGGACAGACTCCACACACTCCCTACGGCTACGGATGTACAAACGATGAGCTGCCCGTTAGCCAGCAATACTGCGCTACGTACAATGTGCTAATAATACTCGAGCTTAAAGCGACAGTTCAGCTAAAATCCAcgtacatattttttaaaattcttttCTTCACTCTGGATCCAAATACCAGAACCGAAATACTAAATCATATGTGATTTAATCCTGATTGTCTAActgatggagtttttttttttttcagaactgtcgctttaaatgtagtaaaactGGAATACgtaaataaaggtaaataaaaagtCTGATAAAGAAGAGTTCTAAGGCTGTGATGTCAGAGTCGCTCATTCGCGGAGTCAATATGTACAGCGTTTCTGCTTTCTTCTGCCGGGtccagagagaaaaatagagagagagagttttaaaaaaaaaataaaataataaaactccCTCCAATTCCTCCCTTTTTCTCCCTTTTCTATTCTCTGTGTTGCCGTCGCTCTCGGCCACACTGCGTTCACAGTGGCCGTTCTGGCGGAGCTGCTGGTTTTTGcatcaaaaatgcaaaaaaaaaaaaaaagtattaataataataataaagagaaaaaaaattctctTTCCAGGATATCAAAACGACGTATTTACAGGCTGAAACAGTTCGCATTTGGTTCGAGTCTTTCTTCTGTACAGGTCAGTCGCAGTCTGTAGTGCTTCTCAGATTTACTGTAGTGTCTGTAGTGTTTTAGGACTGTAGTGTATAGGCTGTTTTGGTCCCTTTTACTCAATTAATCGCAAGACCCCTCCTGAATTCTTAAAACCCCTCTGATCAATCCTGACCACTGTACAAACTCTGCGTACACCAGCCAAACACCAGGGGGAGCACTGAGGCTGCACTAATTCGCTGGTCGCTGATAAGAGCTGCGTTCCTAAGtgttaggcccaatcccatttctaatTTGTACCCCTTCCCTTGTCGTACCCttgttttatttagcaataAAGTTACAAGAGAAACTAATTCCCTATGAATTGGGACAAGGCCCAAATAATTGGACGATTGTGGGCGACAACCTAGCTGCTGGATTTAAGGTAAGATAGATAATTTAAAATTTTCCAAAGCGTCTGCTGCCTGGCAAAACATTTATTGTGGCTAGTTGGCAAGATAGCTACATTTCCCATatcaccttaaatgatgcagccaTTGCTGTCTGTTGtcccatttaaggtggaacgagaAATGCTGCTAGGCATACTACTAGTGATTTTTTATTCTCGTTATGAAGAAAAACTTAGCATTAAACTATAGCAATATagcttatatttttttgtagagGAAAAGATGGCTTGTGTCTCCACATTGCCAGTCATTTCTTATAGCCCCTCCCCCTAGGCGTGAACGTGCAAAACAGCGGGATAGGGCTAAGTGTTTGGGCTAAGGACTGAAATGAGATTGGGCTTAAGTGTAGGCTGTAGACTAGGTAGGCTGCATTGCTTGGCCGCTGTACCAATGAAAGCGTTTGGCGCGATTTGaaggacgcaactgatgtatccttcctggCCATCGTTTACCCATCAACAATCCAAAAACTGGAGCCAGAATGGCAAGAAATGAAGACTCTGCTACAGAgtttgtcttaaaaaaaattcaaaatgaTTTCTGTGAGGAAATGAAAAATGCACACTTGCACGTCACCAGACTGTTTCAATTGTCTGGCCACAAGACAATCCCACTAAGGACCCACCCTACCTTGACTACAGCCTACATCATTTGGAACGCAGCttgtgtagcagtgtgtgtctgtgtgtgtgtgtgttttcacagtCCACCACCTCTAGCTCAGCGGTGTCGATTCTGGCTGGGTTTGAGCTGCTGTATGTCCAGCAGGAGGCACCCTATCCACTTTTGACTCTCCTACACGCTGGACCTGGATCTGTACCGTAGCTGAAGAAGGGGTGTGACTAGTGTGAGCAGAAACTGGATTCCGATTGGCAGCGATTTGAACTGTGGGGGCAGGGCTTCGAGGAAGGACAGGATTGGCTGTGTGGATTGGGCTCTGGGACGGGTTGGGATTAGGGTTTCTGACTGGGACCTGACTGAGACTGGGCAGGTTTTGAGGTGTGTGGGTGGGGCTTCTGGCTGAGACGAGGCCGGGATTGGTTGCATTCTGAAGCCGGGGAACGGGGCTCGTCTGGGCTGGACTCGCCTGGGCAGGCACTGCTAGCCTGACCACCTGTGCGGTGGGTGTGATGGAGCGCAGTGCCAGGGGTGCCCCCAGCAGGCTGAAGCCGGCGGGAGCTGCAGCGCCCCCTTTGGGCTGCAGCTGGCAGTGCGTGAGCTGCGCTGTGGGGATGGTGATTATCTTGGCGAGCTGCACTGTGATCTTCTCTCCGTTCTCCATTGCCGGAACCGTCTGGATCAGGACCTTCTGGGGCGGGGCAGAGCCTCCAGTCACCGTGGTGACACTAGTTGGCACTGTCGCCGCGGTGAGGAGTTGGGGGTTAGCAGACGGAACAGCGACCGTGGAGATCTTTTGGCCCAAGGAGGTCGTCATGACAACTGGCACCTGCATAGCAACGCGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247085 True 2757 TUCP 0.47 2 3547633 3550413

Neighbor

gene id symbol gene type direction distance location
helt helt coding downstream 158377 3385565 ~ 3389256 (-)
LOC103040979 slc25a4,LOC107656452,LOC107562743 coding downstream 206283 3337831 ~ 3341350 (-)
ankrd37 ankrd37 coding downstream 241327 3301420 ~ 3306306 (-)
tlr3 NA coding downstream 390125 3148161 ~ 3157508 (-)
LOC103028260 tusc3,LOC108413602 coding downstream 886407 2566363 ~ 2661226 (-)
pcdh10 LOC108415737 coding upstream 554408 4104821 ~ 4155603 (-)
LOC103028206 NA coding upstream 729873 4280286 ~ 4290987 (-)
c21h4orf33 cunh4orf33,c29h4orf33 coding upstream 841378 4391791 ~ 4395587 (-)
pi4k2b pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 coding upstream 873479 4423892 ~ 4437198 (-)
hgsnat LOC108411545 coding upstream 890136 4440549 ~ 4478292 (-)
G182500 NA non-coding downstream 11031 3536381 ~ 3536602 (-)
G182499 NA non-coding downstream 12014 3534388 ~ 3535619 (-)
G182481 NA non-coding downstream 107877 3437296 ~ 3439756 (-)
G182467 NA non-coding downstream 122772 3364412 ~ 3424861 (-)
G182423 NA non-coding downstream 252677 3230888 ~ 3294956 (-)
G182508 NA non-coding upstream 109825 3660238 ~ 3660492 (-)
G182521 LOC108413018 non-coding upstream 276211 3826624 ~ 3830420 (-)
G182528 NA non-coding upstream 290140 3840553 ~ 3840959 (-)
G182534 NA non-coding upstream 382595 3933008 ~ 3933207 (-)
G182540 NA non-coding upstream 447028 3997441 ~ 3997650 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other downstream 93047 3395119 ~ 3454586 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other downstream 1835496 1585495 ~ 1712137 (-)
cisd2 cisd2 other downstream 3039569 494190 ~ 508064 (-)
LOC103026712 NA other downstream 3499339 45736 ~ 48294 (-)
LOC103027068 NA other upstream 1556623 5107036 ~ 5109098 (-)
G182810 saraf other upstream 1626963 5177376 ~ 5213151 (-)
LOC111195184 NA other upstream 1735533 5285946 ~ 5295716 (-)
G183043 NA other upstream 2560957 6111370 ~ 6113092 (-)
tmsb10 NA other upstream 2801762 6352175 ~ 6408023 (-)

Expression


Co-expression Network