Gene
RNA
| Item | Value |
|---|---|
| gene id | G182550 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 4057080 ~ 4057340 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247143 | True | 261 | lncRNA | 0.33 | 1 | 4057080 | 4057340 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| helt | helt | coding | downstream | 667824 | 3385565 ~ 3389256 (-) |
| LOC103040979 | slc25a4,LOC107656452,LOC107562743 | coding | downstream | 715730 | 3337831 ~ 3341350 (-) |
| ankrd37 | ankrd37 | coding | downstream | 750774 | 3301420 ~ 3306306 (-) |
| tlr3 | NA | coding | downstream | 899572 | 3148161 ~ 3157508 (-) |
| LOC103028260 | tusc3,LOC108413602 | coding | downstream | 1395854 | 2566363 ~ 2661226 (-) |
| pcdh10 | LOC108415737 | coding | upstream | 47481 | 4104821 ~ 4155603 (-) |
| LOC103028206 | NA | coding | upstream | 222946 | 4280286 ~ 4290987 (-) |
| c21h4orf33 | cunh4orf33,c29h4orf33 | coding | upstream | 334451 | 4391791 ~ 4395587 (-) |
| pi4k2b | pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 | coding | upstream | 366552 | 4423892 ~ 4437198 (-) |
| hgsnat | LOC108411545 | coding | upstream | 383209 | 4440549 ~ 4478292 (-) |
| G182540 | NA | non-coding | downstream | 59430 | 3997441 ~ 3997650 (-) |
| G182534 | NA | non-coding | downstream | 123873 | 3933008 ~ 3933207 (-) |
| G182528 | NA | non-coding | downstream | 216121 | 3840553 ~ 3840959 (-) |
| G182521 | LOC108413018 | non-coding | downstream | 226660 | 3826624 ~ 3830420 (-) |
| G182508 | NA | non-coding | downstream | 396588 | 3660238 ~ 3660492 (-) |
| G182557 | NA | non-coding | upstream | 21740 | 4079080 ~ 4079409 (-) |
| G182571 | NA | non-coding | upstream | 99854 | 4157194 ~ 4158785 (-) |
| LOC111195176 | NA | non-coding | upstream | 431224 | 4488564 ~ 4491390 (-) |
| LOC111195177 | NA | non-coding | upstream | 456360 | 4513700 ~ 4515883 (-) |
| LOC111195163 | NA | non-coding | upstream | 735871 | 4793211 ~ 4794427 (-) |
| G182501 | NA | other | downstream | 506667 | 3547633 ~ 3550413 (-) |
| LOC103039001 | caspase-3,LOC108441697,LOC103370277 | other | downstream | 602494 | 3395119 ~ 3454586 (-) |
| LOC103021730 | fat1,fat1a,LOC108441695,LOC107702333 | other | downstream | 2344943 | 1585495 ~ 1712137 (-) |
| cisd2 | cisd2 | other | downstream | 3549016 | 494190 ~ 508064 (-) |
| LOC103026712 | NA | other | downstream | 4008786 | 45736 ~ 48294 (-) |
| LOC103027068 | NA | other | upstream | 1049696 | 5107036 ~ 5109098 (-) |
| G182810 | saraf | other | upstream | 1120036 | 5177376 ~ 5213151 (-) |
| LOC111195184 | NA | other | upstream | 1228606 | 5285946 ~ 5295716 (-) |
| G183043 | NA | other | upstream | 2054030 | 6111370 ~ 6113092 (-) |
| tmsb10 | NA | other | upstream | 2294835 | 6352175 ~ 6408023 (-) |
