G182922


Basic Information

Item Value
gene id G182922
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 5544880 ~ 5545427 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU247712
atgcgcaccctctccgcttttagactctttggcccgtttttctgcgctagaaatgcgcactctctccgcttttagactctttggcccgtttttctgcgctagaaatgcgcactctctccgcttttagactctttggcccgttttttttctgcgctagaaatgcgcactctctccgcttttagactctttggcctgtttttctgcgctagaaatgcgcaccctctccgcttttagactctttggcctgtttttctgcgctagaaatgcgcaccctctccgcttttagactctttggcctgtttttctgcgctagaaatgcgcaccctctccgcttttagactctttggcccgtttctgacacctagcgttcaaactttgaatctcacatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247712 True 389 lncRNA 0.49 2 5544880 5545427

Neighbor

gene id symbol gene type direction distance location
LOC111195262 NA coding downstream 164057 5379717 ~ 5380823 (-)
LOC103026500 saraf coding downstream 331653 5208590 ~ 5213227 (-)
xpa NA coding downstream 340148 5199748 ~ 5204732 (-)
LOC111195182 saraf coding downstream 361866 5177370 ~ 5183014 (-)
LOC111195181 NA coding downstream 386453 5155745 ~ 5158427 (-)
LOC103031479 mtnr1aa,LOC107656395,LOC107746022,LOC107702348,LOC107754134 coding upstream 74765 5620192 ~ 5694606 (-)
LOC111195189 NA coding upstream 290232 5835659 ~ 5844491 (-)
LOC111195190 klf12b,klf12,LOC107668887,LOC107740907 coding upstream 320607 5866034 ~ 5890681 (-)
tbc1d1 tbc1d1 coding upstream 383311 5928738 ~ 6024934 (-)
pgm2 pgm2,LOC107746017,LOC107591526,LOC107551595 coding upstream 485283 6030710 ~ 6048490 (-)
G182908 NA non-coding downstream 48147 5493842 ~ 5496733 (-)
LOC111195188 NA non-coding downstream 91120 5398570 ~ 5453760 (-)
G182890 NA non-coding downstream 126945 5417403 ~ 5417935 (-)
G182871 clta non-coding downstream 181808 5339971 ~ 5363072 (-)
G182875 NA non-coding downstream 185936 5357542 ~ 5358944 (-)
G182943 LOC108414272,LOC107741621,LOC107564376,LOC107559181,LOC108414004,LOC107559180,LOC108415460 non-coding upstream 163952 5709379 ~ 5710339 (-)
G182949 NA non-coding upstream 168460 5713887 ~ 5714280 (-)
G182951 NA non-coding upstream 169267 5714694 ~ 5715119 (-)
G182956 NA non-coding upstream 289564 5834991 ~ 5835563 (-)
G183016 NA non-coding upstream 417031 5962458 ~ 5963350 (-)
LOC111195184 NA other downstream 249164 5285946 ~ 5295716 (-)
G182810 saraf other downstream 331729 5177376 ~ 5213151 (-)
LOC103027068 NA other downstream 435782 5107036 ~ 5109098 (-)
G182501 NA other downstream 1994467 3547633 ~ 3550413 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other downstream 2090294 3395119 ~ 3454586 (-)
G183043 NA other upstream 565943 6111370 ~ 6113092 (-)
tmsb10 NA other upstream 806748 6352175 ~ 6408023 (-)
LOC111195197 zgc:195282,LOC108413380,LOC107702293,LOC107591529,LOC107754142,LOC108260812,LOC107656338 other upstream 876676 6422103 ~ 6426583 (-)
LOC103028119 gria2a,LOC108443988,LOC107548351,LOC108260487,LOC107750427,LOC107702389,LOC107745055,LOC107655932,LOC107591557 other upstream 1619966 7165393 ~ 7303192 (-)
LOC111195271 NA other upstream 1944648 7490075 ~ 7502429 (-)

Expression


Co-expression Network