G183571


Basic Information

Item Value
gene id G183571
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 9730071 ~ 9735156 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU248685
gtgtcgagtcttttgtattttgtattttgtatgctGTATCTTTGTATCCCTGCAGTCCGTTTGTAGCCTagtcttagtttcttagtctgtgtttcttgtATCCTCgtcttagtttcttagtcaGTGTTTCTCAGTTTATATTATCCAAGCCTTGTTgttttgcgttacccgtgttttgtttgttttgatttatcttgtttgtttaaaataaatattatctttgcacttacgtcgtcctcctccatccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248685 True 248 lncRNA 0.36 2 9730071 9735156

Neighbor

gene id symbol gene type direction distance location
spock3 spock3 coding downstream 667245 9013877 ~ 9062826 (-)
LOC111195270 NA coding downstream 2245313 7481599 ~ 7484758 (-)
ncapd3 ncapd3 coding downstream 2271341 7419349 ~ 7458730 (-)
wdr19 wdr19,LOC107591558,LOC107750430 coding downstream 2313038 7380244 ~ 7417033 (-)
LOC103041735 glrba,LOC108443987,LOC107702391,LOC107591559,LOC107655919,LOC107548353 coding downstream 2361837 7309521 ~ 7368234 (-)
mettl14 mettl14,LOC107754186,LOC107591585 coding upstream 33374 9768530 ~ 9791976 (-)
LOC103026071 NA coding upstream 170446 9905602 ~ 9953226 (-)
LOC111195209 NA coding upstream 427246 10162402 ~ 10164894 (-)
smox smox,LOC107689473,LOC107551695,LOC107551688,LOC107692173 coding upstream 462250 10197406 ~ 10219861 (-)
fbxo41 fbxo41,LOC108260496,LOC107689471 coding upstream 597011 10332167 ~ 10429408 (-)
G183536 NA non-coding downstream 423388 9305401 ~ 9306683 (-)
G183534 NA non-coding downstream 436364 9293019 ~ 9293707 (-)
G183532 NA non-coding downstream 446589 9281295 ~ 9283482 (-)
G183354 cpe,LOC107548348,LOC107745061 non-coding downstream 898948 8828192 ~ 8831123 (-)
G183349 NA non-coding downstream 918257 8793292 ~ 8811814 (-)
G183594 NA non-coding upstream 129997 9865153 ~ 9868427 (-)
G183610 NA non-coding upstream 192993 9928149 ~ 9932597 (-)
G183614 NA non-coding upstream 207468 9942624 ~ 9943217 (-)
G183629 NA non-coding upstream 271527 10006683 ~ 10033241 (-)
G183627 NA non-coding upstream 278775 10013931 ~ 10019081 (-)
G183559 NA other downstream 72457 9655313 ~ 9657614 (-)
LOC111195271 NA other downstream 2227642 7490075 ~ 7502429 (-)
LOC103028119 gria2a,LOC108443988,LOC107548351,LOC108260487,LOC107750427,LOC107702389,LOC107745055,LOC107655932,LOC107591557 other downstream 2426879 7165393 ~ 7303192 (-)
LOC111195197 zgc:195282,LOC108413380,LOC107702293,LOC107591529,LOC107754142,LOC108260812,LOC107656338 other downstream 3303488 6422103 ~ 6426583 (-)
tmsb10 NA other downstream 3322048 6352175 ~ 6408023 (-)
G183585 NA other upstream 110666 9845822 ~ 9852381 (-)
G183880 NA other upstream 1571133 11306289 ~ 11306821 (-)
gtf2a1l NA other upstream 1667551 11402707 ~ 11411644 (-)
G184051 NA other upstream 2460056 12195212 ~ 12196658 (-)
LOC111195225 NA other upstream 3491177 13226333 ~ 13303680 (-)

Expression


Co-expression Network