G183627


Basic Information

Item Value
gene id G183627
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 10013931 ~ 10019081 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU248767
cctgctctgctccctgctctgctccctgctctgctccctgctctgctctctactactctggtctgctgctgtgctggtctgctgctgtgctgctctgctgctgaaagcttgctttaatcttcagcttctacacttttctctgttttcttctcttttactctcttcacacttactaatccacttttagtctgcttcctctttgctctacacacctattaatccactctcagtctacttttatagactttttcctcaggtttgctggattagctgtttgctgctgcagtttgtttgtgtaagtttctaatttcaactgaaacaaggctctcgcgtctcctgtccggccagactgatggaagtttctgaagtcagctcttctccaccaccaccacagatcagctgctcatcgaccatcttactctccactacagattacatccaagccattagtggcgctattacactcctgagtacataaaacctatatggatgtataaaagactttttaaatcttaatttaaaagccgtttgaccagtggtaggatggtcccccctttaatgtgagtcttggtcctcccaaggtttcttcctcctcctgcagctctgagggagtttttccttgcctccgcgctcactgggggttctgtattctgtattttctatgtgtaatgttttgcctgattctttgtcctgtaatcatgtttctgtaaagctgctttgtgccaacacctgttgtaaaaagcgctatacaaataaatttgatttgatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248767 True 769 lncRNA 0.44 2 10013931 10019081

Neighbor

gene id symbol gene type direction distance location
LOC103026071 NA coding downstream 60705 9905602 ~ 9953226 (-)
mettl14 mettl14,LOC107754186,LOC107591585 coding downstream 221955 9768530 ~ 9791976 (-)
prss12 prss12 coding downstream 247973 9676597 ~ 9765958 (-)
spock3 spock3 coding downstream 951105 9013877 ~ 9062826 (-)
LOC111195270 NA coding downstream 2529173 7481599 ~ 7484758 (-)
LOC111195209 NA coding upstream 143321 10162402 ~ 10164894 (-)
smox smox,LOC107689473,LOC107551695,LOC107551688,LOC107692173 coding upstream 178325 10197406 ~ 10219861 (-)
fbxo41 fbxo41,LOC108260496,LOC107689471 coding upstream 313086 10332167 ~ 10429408 (-)
LOC103029885 LOC108434384,LOC108435548,LOC107702154 coding upstream 455321 10474402 ~ 10479174 (-)
mogs mogs,LOC106609973,LOC106602766 coding upstream 479764 10498845 ~ 10507395 (-)
G183614 NA non-coding downstream 70714 9942624 ~ 9943217 (-)
G183610 NA non-coding downstream 81334 9928149 ~ 9932597 (-)
G183594 NA non-coding downstream 145504 9865153 ~ 9868427 (-)
G183571 NA non-coding downstream 278775 9730071 ~ 9735156 (-)
G183536 NA non-coding downstream 707248 9305401 ~ 9306683 (-)
G183637 NA non-coding upstream 17491 10036572 ~ 10037341 (-)
G183640 NA non-coding upstream 26131 10045212 ~ 10045491 (-)
G183656 NA non-coding upstream 54201 10073282 ~ 10073666 (-)
G183658 NA non-coding upstream 54690 10073771 ~ 10074154 (-)
G183699 LOC107715185,LOC107581013,LOC107690133,LOC107745493,LOC107740227,LOC108417841,LOC107738483,LOC108421775,LOC108419634 non-coding upstream 84911 10103992 ~ 10174643 (-)
G183585 NA other downstream 161550 9845822 ~ 9852381 (-)
G183559 NA other downstream 356317 9655313 ~ 9657614 (-)
LOC111195271 NA other downstream 2511502 7490075 ~ 7502429 (-)
LOC103028119 gria2a,LOC108443988,LOC107548351,LOC108260487,LOC107750427,LOC107702389,LOC107745055,LOC107655932,LOC107591557 other downstream 2710739 7165393 ~ 7303192 (-)
LOC111195197 zgc:195282,LOC108413380,LOC107702293,LOC107591529,LOC107754142,LOC108260812,LOC107656338 other downstream 3587348 6422103 ~ 6426583 (-)
G183880 NA other upstream 1287208 11306289 ~ 11306821 (-)
gtf2a1l NA other upstream 1383626 11402707 ~ 11411644 (-)
G184051 NA other upstream 2176131 12195212 ~ 12196658 (-)
LOC111195225 NA other upstream 3207252 13226333 ~ 13303680 (-)
LOC111195226 NA other upstream 3532051 13551132 ~ 13594753 (-)

Expression


Co-expression Network