G183637


Basic Information

Item Value
gene id G183637
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 10036572 ~ 10037341 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU248782
tgtgcttcaaggcgaaagaccggtatgcattttgtgttactgaccaaaataaacgctttttagaagagatataaattatgtgtaaatatttataagacaatagctgataaaatctgttttaatgaggttaataaacatcactgtgacatcgctagtcgcagtttcacctcagcaaaggacgaggacgtgaatcacttatctaaccagcctttactgatttctgcccccaataaccctttcaataacctccaatagcctttaatagtctccagtagccttcaacagtctaaccttgcagccgtggtgtgttctaaactccgtagttataaacatcctgaggttagcagcgcgctaactgacctgtttataatgtaatccgagcagtgactccgggatggctgctctaaactgctgctgttagctgcttgggctgaaatatgaactgtagagagctgtattatccggttagtggggttattttatttcatacacagaagaacttaaaattttaaaaacgctccagactggctcagctgagtcctgtagcccgtggctgggctgtagctctgactcagtaaagactgtgggcttgtgctgctgcagctcccactagtggttggatgaggaaatgctaaatctgtcacagctcacaatttttgattttatatttattaagcctcttttcagtatcaaacgttttgatcaaagttaatataacttgtattttatgtcatttctattcacttgtatagtttggttcttgattgatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248782 True 770 lncRNA 0.40 1 10036572 10037341

Neighbor

gene id symbol gene type direction distance location
LOC103026071 NA coding downstream 83346 9905602 ~ 9953226 (-)
mettl14 mettl14,LOC107754186,LOC107591585 coding downstream 244596 9768530 ~ 9791976 (-)
prss12 prss12 coding downstream 270614 9676597 ~ 9765958 (-)
spock3 spock3 coding downstream 973746 9013877 ~ 9062826 (-)
LOC111195270 NA coding downstream 2551814 7481599 ~ 7484758 (-)
LOC111195209 NA coding upstream 125061 10162402 ~ 10164894 (-)
smox smox,LOC107689473,LOC107551695,LOC107551688,LOC107692173 coding upstream 160065 10197406 ~ 10219861 (-)
fbxo41 fbxo41,LOC108260496,LOC107689471 coding upstream 294826 10332167 ~ 10429408 (-)
LOC103029885 LOC108434384,LOC108435548,LOC107702154 coding upstream 437061 10474402 ~ 10479174 (-)
mogs mogs,LOC106609973,LOC106602766 coding upstream 461504 10498845 ~ 10507395 (-)
G183629 NA non-coding downstream 3331 10006683 ~ 10033241 (-)
G183627 NA non-coding downstream 17491 10013931 ~ 10019081 (-)
G183614 NA non-coding downstream 93355 9942624 ~ 9943217 (-)
G183610 NA non-coding downstream 103975 9928149 ~ 9932597 (-)
G183594 NA non-coding downstream 168145 9865153 ~ 9868427 (-)
G183640 NA non-coding upstream 7871 10045212 ~ 10045491 (-)
G183656 NA non-coding upstream 35941 10073282 ~ 10073666 (-)
G183658 NA non-coding upstream 36430 10073771 ~ 10074154 (-)
G183699 LOC107715185,LOC107581013,LOC107690133,LOC107745493,LOC107740227,LOC108417841,LOC107738483,LOC108421775,LOC108419634 non-coding upstream 66651 10103992 ~ 10174643 (-)
G183712 NA non-coding upstream 114295 10151636 ~ 10158717 (-)
G183585 NA other downstream 184191 9845822 ~ 9852381 (-)
G183559 NA other downstream 378958 9655313 ~ 9657614 (-)
LOC111195271 NA other downstream 2534143 7490075 ~ 7502429 (-)
LOC103028119 gria2a,LOC108443988,LOC107548351,LOC108260487,LOC107750427,LOC107702389,LOC107745055,LOC107655932,LOC107591557 other downstream 2733380 7165393 ~ 7303192 (-)
LOC111195197 zgc:195282,LOC108413380,LOC107702293,LOC107591529,LOC107754142,LOC108260812,LOC107656338 other downstream 3609989 6422103 ~ 6426583 (-)
G183880 NA other upstream 1268948 11306289 ~ 11306821 (-)
gtf2a1l NA other upstream 1365366 11402707 ~ 11411644 (-)
G184051 NA other upstream 2157871 12195212 ~ 12196658 (-)
LOC111195225 NA other upstream 3188992 13226333 ~ 13303680 (-)
LOC111195226 NA other upstream 3513791 13551132 ~ 13594753 (-)

Expression


Co-expression Network