G183771


Basic Information

Item Value
gene id G183771
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 10446561 ~ 10446772 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU249017
tttttaaattagattatgcaatatatttggtaacttacagtaacagggttgcgagtaacagggttgcaaatctaggctaagttgtggtttaccccaggaacagatgctaactgtaaaatttagctatgtatacaagatcaaggacaaacatggttatataagtatataaagtaaattctgactctactcattattagtcttacaatatgagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249017 True 212 lncRNA 0.32 1 10446561 10446772

Neighbor

gene id symbol gene type direction distance location
fbxo41 fbxo41,LOC108260496,LOC107689471 coding downstream 17153 10332167 ~ 10429408 (-)
smox smox,LOC107689473,LOC107551695,LOC107551688,LOC107692173 coding downstream 226700 10197406 ~ 10219861 (-)
LOC111195209 NA coding downstream 281667 10162402 ~ 10164894 (-)
LOC103026071 NA coding downstream 493335 9905602 ~ 9953226 (-)
mettl14 mettl14,LOC107754186,LOC107591585 coding downstream 654585 9768530 ~ 9791976 (-)
LOC103029885 LOC108434384,LOC108435548,LOC107702154 coding upstream 27630 10474402 ~ 10479174 (-)
mogs mogs,LOC106609973,LOC106602766 coding upstream 52073 10498845 ~ 10507395 (-)
ston1 ston1 coding upstream 965838 11412610 ~ 11426503 (-)
rps27a rps27a coding upstream 982477 11429249 ~ 11431897 (-)
ccdc88a ccdc88a coding upstream 1064408 11511180 ~ 11574143 (-)
G183769 NA non-coding downstream 13370 10430741 ~ 10433191 (-)
LOC111195213 NA non-coding downstream 183561 10254325 ~ 10263000 (-)
G183753 NA non-coding downstream 198281 10248067 ~ 10248280 (-)
G183699 LOC107715185,LOC107581013,LOC107690133,LOC107745493,LOC107740227,LOC108417841,LOC107738483,LOC108421775,LOC108419634 non-coding downstream 271918 10103992 ~ 10174643 (-)
G183840 NA non-coding upstream 212225 10658997 ~ 10659334 (-)
G183854 NA non-coding upstream 397429 10844201 ~ 10844599 (-)
G183857 NA non-coding upstream 508827 10955599 ~ 11187542 (-)
LOC111195215 NA non-coding upstream 710510 11157282 ~ 11177184 (-)
G183884 NA non-coding upstream 900138 11346910 ~ 11347163 (-)
G183585 NA other downstream 594180 9845822 ~ 9852381 (-)
G183559 NA other downstream 788947 9655313 ~ 9657614 (-)
LOC111195271 NA other downstream 2944132 7490075 ~ 7502429 (-)
LOC103028119 gria2a,LOC108443988,LOC107548351,LOC108260487,LOC107750427,LOC107702389,LOC107745055,LOC107655932,LOC107591557 other downstream 3143369 7165393 ~ 7303192 (-)
LOC111195197 zgc:195282,LOC108413380,LOC107702293,LOC107591529,LOC107754142,LOC108260812,LOC107656338 other downstream 4019978 6422103 ~ 6426583 (-)
G183880 NA other upstream 859517 11306289 ~ 11306821 (-)
gtf2a1l NA other upstream 955935 11402707 ~ 11411644 (-)
G184051 NA other upstream 1748440 12195212 ~ 12196658 (-)
LOC111195225 NA other upstream 2779561 13226333 ~ 13303680 (-)
LOC111195226 NA other upstream 3104360 13551132 ~ 13594753 (-)

Expression


Co-expression Network