G184854


Basic Information

Item Value
gene id G184854
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 15665178 ~ 15665714 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250487
TCTACTtaaggtaaaacacacatgaaacattttttcatatacagctacattaatTCAGGCGTTAAGGGTTAATATAAATTTgggatatattgcaatactgtaagcaaagcAATATTTTGCGattgtttaaatcaaaatttTAGGGAACTGTCAtggtataaaaacacattattatattattaaatctaaaagtaaaagaaaacattactttttatgtaattataaacctaatgataaaaaaattataatgtgttttggAGAATCGATACAggattgcaaaacaaaatatcacaatacgatcaatatcaatattttttttttcttacacccctTGTGGAGAGTCTCTTTATTTAGAGCAGATTACATCTAAAACAGACacctataatataattttgatttaatataatttgggatatattgcaatactgtaagcaaagcAATATTTTGCGAttgtttaaatcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250487 True 463 lncRNA 0.25 2 15665178 15665714

Neighbor

gene id symbol gene type direction distance location
ugdh ugdh,LOC107757604 coding downstream 5612 15645138 ~ 15659566 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding downstream 28086 15632254 ~ 15637092 (-)
rfc1 rfc1,LOC102787736 coding downstream 35173 15616094 ~ 15630005 (-)
LOC103043828 LOC108437730 coding downstream 104346 15428393 ~ 15560832 (-)
LOC103041363 qdpr,dhpr,qdprb1,LOC108437732,LOC107750446,LOC107702409,LOC107562607 coding downstream 292741 15367109 ~ 15372437 (-)
pds5a pds5a,LOC107757607 coding upstream 19102 15684816 ~ 15707540 (-)
gpr75 gpr75,LOC107602942,LOC107683917,LOC107654975,LOC107553188,LOC107705414,LOC107739897 coding upstream 97472 15763186 ~ 15767780 (-)
dctpp1 dctpp1 coding upstream 429316 16095030 ~ 16096320 (-)
fam160a1 fam160a1 coding upstream 453960 16119674 ~ 16141270 (-)
rps3a rps3a,LOC107695588 coding upstream 514356 16180070 ~ 16184812 (-)
G184853 NA non-coding downstream 293 15660667 ~ 15664885 (-)
G184836 NA non-coding downstream 100295 15564622 ~ 15564883 (-)
LOC111195235 NA non-coding downstream 245971 15412667 ~ 15419207 (-)
G184816 gtf2e2,LOC107671915,LOC107548363 non-coding downstream 278077 15384714 ~ 15387101 (-)
G184818 NA non-coding downstream 285972 15372772 ~ 15379206 (-)
G184863 NA non-coding upstream 55593 15721307 ~ 15722297 (-)
G184865 NA non-coding upstream 60650 15726364 ~ 15726622 (-)
G184868 NA non-coding upstream 66667 15732381 ~ 15732755 (-)
G184869 NA non-coding upstream 67085 15732799 ~ 15733086 (-)
G184870 NA non-coding upstream 78610 15744324 ~ 15744556 (-)
smim18 smim18 other downstream 283970 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 324598 15309509 ~ 15340580 (-)
LOC103032041 NA other downstream 1548722 14063644 ~ 14116456 (-)
smim14 smim14 other upstream 397 15666111 ~ 15671954 (-)
lrat lrat other upstream 1232464 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 1564371 17230085 ~ 17241027 (-)
G185295 NA other upstream 1586553 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 1629787 17295501 ~ 17300782 (-)

Expression


Co-expression Network