G184863


Basic Information

Item Value
gene id G184863
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 15721307 ~ 15722297 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250496
ccacgccaatacatttcatcgtagcctacttcaTATAtctgcatgaataattgatgaaattactgtagaaacgatagggatcatagaaggtaagtagcacaatagacacttttctatcgtccccacgatatttatcatcatatcgcacagcactagtaGGAAGAACCCCCTGGATGGGGATTCTGGTAACAGGGTAGTTGTAATTTCCTGCATTCAATTCATAATCAGTCATTGTCTGACAACAAGGCTGGATAGAGCAGTGATCTGTTGTGCTGATGGAGTGCTGGAACGAGTGGATcaaaaacagcagtgctgctggagttcttgattggttaattggtaTGCTGGGGGAAGCTGACAGAATTGATCAACTATATAGAATTAAAGCTGACTGCTGCATTATATTCTATGCTGAACGTTCCAAACCAAAAGAAGTAGATGATGTTAGCAAAAATAGACTAAATCTGGTGTTAAAAGAAAGAGTTTAGGTGTATATACCTGTAATGTTGGCTCTTGAGGTAGTCCAGAACAGCAGGCCTGACACGGGCAACGCCTCCTTGACTGTGATTGCCTCTTCCTGTGATAATGGACAGCTGGGGACGGCATAAACCCTGCTGCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250496 True 621 lncRNA 0.42 2 15721307 15722297

Neighbor

gene id symbol gene type direction distance location
pds5a pds5a,LOC107757607 coding downstream 13767 15684816 ~ 15707540 (-)
ugdh ugdh,LOC107757604 coding downstream 61741 15645138 ~ 15659566 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding downstream 84215 15632254 ~ 15637092 (-)
rfc1 rfc1,LOC102787736 coding downstream 91302 15616094 ~ 15630005 (-)
LOC103043828 LOC108437730 coding downstream 160475 15428393 ~ 15560832 (-)
gpr75 gpr75,LOC107602942,LOC107683917,LOC107654975,LOC107553188,LOC107705414,LOC107739897 coding upstream 40889 15763186 ~ 15767780 (-)
dctpp1 dctpp1 coding upstream 372733 16095030 ~ 16096320 (-)
fam160a1 fam160a1 coding upstream 397377 16119674 ~ 16141270 (-)
rps3a rps3a,LOC107695588 coding upstream 457773 16180070 ~ 16184812 (-)
mab21l2 mab21l2 coding upstream 629277 16351574 ~ 16356009 (-)
G184854 NA non-coding downstream 55593 15665178 ~ 15665714 (-)
G184853 NA non-coding downstream 56422 15660667 ~ 15664885 (-)
G184836 NA non-coding downstream 156424 15564622 ~ 15564883 (-)
LOC111195235 NA non-coding downstream 302100 15412667 ~ 15419207 (-)
G184816 gtf2e2,LOC107671915,LOC107548363 non-coding downstream 334206 15384714 ~ 15387101 (-)
G184865 NA non-coding upstream 4067 15726364 ~ 15726622 (-)
G184868 NA non-coding upstream 10084 15732381 ~ 15732755 (-)
G184869 NA non-coding upstream 10502 15732799 ~ 15733086 (-)
G184870 NA non-coding upstream 22027 15744324 ~ 15744556 (-)
G184871 chrna9,LOC107700259,LOC107660492,LOC107548308,LOC107757584,LOC105009502 non-coding upstream 26360 15748657 ~ 15748986 (-)
smim14 smim14 other downstream 49353 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 340099 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 380727 15309509 ~ 15340580 (-)
LOC103032041 NA other downstream 1604851 14063644 ~ 14116456 (-)
lrat lrat other upstream 1175881 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 1507788 17230085 ~ 17241027 (-)
G185295 NA other upstream 1529970 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 1573204 17295501 ~ 17300782 (-)
nutm1 NA other upstream 1591073 17313370 ~ 17328889 (-)

Expression


Co-expression Network