G184874


Basic Information

Item Value
gene id G184874
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 15771704 ~ 15772095 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250510
ttaaataaaagctaaaataaaattcCATAGTAGTATAgtctcatatacacacaccacacatactgTAAACTCATATCAGACATCAGCGAGTGAATGCCAGACAGAGCAGGAAAGTCTTGGAGAGGACAACTACAACAAATGAGTTCCATCTGGTTCTGTTTTTCAGTGCTATCGCTACacaaagaactaaaaaaaaaaaaaaacagaacagaacatttCCCTGCAGCCGGACCTGTTCACCCTCCACAAacttcacctctctctctctttcttcggCTCACACTGACGCTCGATCGAGGTTCAAGTTCCTTCCTGGAAGACAACCTGCTTTTCTAGTCCGATCTTTTACCAGATGCTTGGAGGGAGGGGAGCAGAGGAAGCCTGTGATGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250510 True 392 lncRNA 0.43 1 15771704 15772095

Neighbor

gene id symbol gene type direction distance location
gpr75 gpr75,LOC107602942,LOC107683917,LOC107654975,LOC107553188,LOC107705414,LOC107739897 coding downstream 3924 15763186 ~ 15767780 (-)
pds5a pds5a,LOC107757607 coding downstream 64164 15684816 ~ 15707540 (-)
ugdh ugdh,LOC107757604 coding downstream 112138 15645138 ~ 15659566 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding downstream 134612 15632254 ~ 15637092 (-)
rfc1 rfc1,LOC102787736 coding downstream 141699 15616094 ~ 15630005 (-)
dctpp1 dctpp1 coding upstream 322935 16095030 ~ 16096320 (-)
fam160a1 fam160a1 coding upstream 347579 16119674 ~ 16141270 (-)
rps3a rps3a,LOC107695588 coding upstream 407975 16180070 ~ 16184812 (-)
mab21l2 mab21l2 coding upstream 579479 16351574 ~ 16356009 (-)
trnaw-cca_46 NA coding upstream 804728 16576823 ~ 16576895 (-)
G184871 chrna9,LOC107700259,LOC107660492,LOC107548308,LOC107757584,LOC105009502 non-coding downstream 22718 15748657 ~ 15748986 (-)
G184870 NA non-coding downstream 27148 15744324 ~ 15744556 (-)
G184869 NA non-coding downstream 38618 15732799 ~ 15733086 (-)
G184868 NA non-coding downstream 38949 15732381 ~ 15732755 (-)
G184865 NA non-coding downstream 45082 15726364 ~ 15726622 (-)
G184881 NA non-coding upstream 119685 15891780 ~ 15946458 (-)
LOC111195237 NA non-coding upstream 169003 15941098 ~ 15966413 (-)
LOC111195239 NA non-coding upstream 219921 15992016 ~ 16093276 (-)
G184898 NA non-coding upstream 241922 16014017 ~ 16014526 (-)
G184902 gatb non-coding upstream 324916 16097011 ~ 16098492 (-)
smim14 smim14 other downstream 99750 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 390496 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 431124 15309509 ~ 15340580 (-)
trnas-gcu_6 NA other downstream 1680114 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 1681917 14089706 ~ 14089787 (-)
lrat lrat other upstream 1126083 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 1457990 17230085 ~ 17241027 (-)
G185295 NA other upstream 1480172 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 1523406 17295501 ~ 17300782 (-)
nutm1 NA other upstream 1541275 17313370 ~ 17328889 (-)

Expression


Co-expression Network