G185012 (myoz2,LOC107695402,LOC103360806,LOC102203409,LOC100711322)


Basic Information

Item Value
gene id G185012
gene name myoz2,LOC107695402,LOC103360806,LOC102203409,LOC100711322
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 16699724 ~ 16701308 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250695
gtttttaatcacagtttttatgcatcttggcattttatcctccaccagtcttacacactgcttttggataactttatgctgctttacttctggtgcaaaaattcaggtagttcagtttggtttgatggcttgtgatcatccatcttcctcttgattacattccagatgtttttaatttggtaaaataaaagaaagaagtgtcttattttttccagagctacaAATACTATTAAGTCTAGTGGGAATAACTTGCGTTAGCTGTCTAGGTAATTATTAATTAGCTAGATCAGATGAGTTAGACTGTTCCACGCTAACAGCAGACTTactgaataaaaacaacaaaaaagtttttttcatgtGACCAACAGCACAATAACAGCACATGATCAATAATAGTATAATTAACTAACTCGTTATCTATCTGACAGCTTTATTACAACTATAACTGATCTGTTCCAGCCAATAATGCCTgtcaattacttaattactaagTGTAGCTCCGCCTTcttatgataaaataaaatagtagaatacgtttaaaaactcattttttagaaaACTGTTCCAACTGTTGGAATTGCTGAAAATCTGGGGATGGAAAGAaagtttagaaaataaaaaaattatgaaaaatagCTGCTGTTTGAGCTGTTTGTCATTAAAACAAATGGGGATGGGCAGAGCTaaacatcatactgcaaccagccagcagaggcactagaccTGTGGTTGGTGATTTCATTGatttagattaaataaaaatcattactAATATTCATTTCCCACTtttattgtaaactatttaaaataattatttgtaactatttaaatctgcattttgtattattaaaatatataaaatttacctGACTTTTGATttagatacatttttaaacaattttattaattaaatctgaataaacaaaatactggtTACATTATTAATCTAATTATTTGATAAGAGAACAATCATGGTACTCTAAttcttcacctaaaactttctTTAGCACAGTGTTTGTACTAAGTTGAAGCTAAGTTGCTAACTTGCTAATAGATTACGCTTTAAAGATTAAGGAACTGGTTCACCAGCTTGTTGCTGTCAGATCATGTTGGACCAATCAGCCATTAAATCACTGAGCCAACCAATCAAGACTCAAGCTCTTTGTAGAGGATGTCTTTGGCTACGTTCCAAAACCAGTTTCCGTATCCCAGTCTTGTTTACTTAACATGAGGGAATATTAAACTGGTTTTGGATCAGCCGTGGGGGACCACCTTTAAAAAAGACCCTCTACCCCAGAACATACGGACGCAGTGTTCACAGTTACAGGTCATCAGACTCGGGGATCTCGGGGGGCTCCACGGGGATGGTGGGCAGGATGAGGGGCAGGCCGTCGGAGATCCAGCCCTGGGCGGTCCTGTTGAAGGTGGGCCGCTTGGCTGCAGGGTCCTGAAGCTCAGGGTATCTCTGTGGGTTCAGGTCGACCTCCGGGAGCTTGAAGGTGATTCCTCGAGGGGCTTTCTCAAATCCTCCGAATGGTGTGGCCACCCTG

Function

symbol description
myoz2 Enables telethonin binding activity. Predicted to be involved in several processes, including negative regulation of calcineurin-NFAT signaling cascade; sarcomere organization; and skeletal muscle fiber adaptation. Predicted to be located in sarcomere. Predicted to be active in Z disc and actin cytoskeleton. Implicated in hypertrophic cardiomyopathy 16.

NR:

description
PREDICTED: myozenin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250695 True 1550 lncRNA 0.37 2 16699724 16701308

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_39 NA coding downstream 56993 16642659 ~ 16642731 (-)
trnaq-uug_3 NA coding downstream 57121 16642531 ~ 16642603 (-)
trnar-ucg_17 NA coding downstream 57479 16642173 ~ 16642245 (-)
trnar-acg_19 NA coding downstream 57582 16642068 ~ 16642142 (-)
trnar-ucg_16 NA coding downstream 57686 16641966 ~ 16642038 (-)
fabp2 fabp2,LOC108434304,LOC107714631,LOC107572697,LOC107700317,LOC107695844 coding upstream 49344 16750652 ~ 16756899 (-)
gucy1b3 gucy1b3,LOC107714654,LOC107757623 coding upstream 64119 16765427 ~ 16798748 (-)
gucy1a3 gucy1a3,LOC107572203,LOC107695445,LOC107700279,LOC107598251 coding upstream 103269 16804577 ~ 16827354 (-)
npy2r npy2r,LOC107700264 coding upstream 169709 16871017 ~ 16874481 (-)
fhdc1 fhdc1 coding upstream 341567 17042875 ~ 17059662 (-)
G185000 NA non-coding downstream 17867 16677975 ~ 16681857 (-)
G184998 NA non-coding downstream 24715 16674125 ~ 16675009 (-)
G184996 NA non-coding downstream 42132 16655797 ~ 16657592 (-)
G184991 NA non-coding downstream 55448 16643997 ~ 16644276 (-)
G184990 NA non-coding downstream 55796 16643491 ~ 16643928 (-)
G185027 NA non-coding upstream 131158 16832466 ~ 16832777 (-)
G185033 NA non-coding upstream 156083 16857391 ~ 16864206 (-)
G185041 fgg,LOC106602564 non-coding upstream 219728 16921036 ~ 16922494 (-)
G185073 NA non-coding upstream 264701 16966009 ~ 16969764 (-)
G185079 NA non-coding upstream 330823 17032131 ~ 17032392 (-)
smim14 smim14 other downstream 1027770 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 1318516 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 1359144 15309509 ~ 15340580 (-)
trnas-gcu_6 NA other downstream 2608134 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 2609937 14089706 ~ 14089787 (-)
lrat lrat other upstream 196870 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 528777 17230085 ~ 17241027 (-)
G185295 NA other upstream 550959 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 594193 17295501 ~ 17300782 (-)
nutm1 NA other upstream 612062 17313370 ~ 17328889 (-)

Expression


Co-expression Network