G185033


Basic Information

Item Value
gene id G185033
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 16857391 ~ 16864206 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250726
TCAGATCAGAGCACACGAGCATGATACAGCAGATCTGCTCTGTAATCAGATTAGACTGAACAGCGTATGAAGAATATCTGATACAGTATCGGTCTGATAGATCAGCCGTTACAGAGATACGGTGGAGATGCTGGTGAGATGCTCCTTATTTACCGAAGGGAACGGTTCTGTTGGGTGGGCTCCAGGGGGGAGGGGGCTCGTCCTGAACGATGGCCTTGATCTTCTTCTCCTGTTTCTCTCGTTTCTGCTGaaactcttttcttttCAGCCATTTCTCATACATCTCCAGCGcagtcttctctctctcctccttctgATATTTCTCCTCGATCTCTTTGATCTTCTCCTTCTCTCGCTCTTCTTTCAGCTTCTCCTGAAGAGCGTCCTTCTTTTTTTCACTCcacAGACTGAAGGATGAGCCGCAGTCTCTCCTCCGttcctcctgctctctctccttcctgTCCTTCAGCCGGTTCTTCTGCTGCGTCTGTTTGAGGTGCTGCTCCTGCAGACGCTCTTCATGCTCCTGCTTCCACTTCTCAAACACTCTTTTCGCAGTttcctttttctcctctttctcttcctgcTCTTTCTGCTGTTTCTTCAGCACCTCCtgcttttctctcactttctccctcAGGGTTTCCTGTTTCTTCTCCTTCCAGGCTTCATACGAGGCTTTAGCTTCTGCTTTCTTGCTCATCTCCTCCTCCACCTTCTTCTCCACCTTCAGTTTCTCCTCCTGCTTTTTTAATTTCAGAGCTTCCTGCAgtttctcctctttcttcttcAGCCACTCCTGGTACACGGCGGCTCTGAGGGAATCCGCGGTGTCCGGCTGGAGCTGCGGCACAGATTTCTGATCTAAAACCTTCAGAGAGCCCAGGTATCTGGACTGTGCTGAGTAGGAGGAACAGGCACTCCTGGATTTCCTGGAGCTGAGCGGCCGAGAGCTGGAGGGTCTGCAGGTGAAGAAGCAGAGCTGTgaagctggagagagagagtgtgtgtgtgtgtgtgtgtgagagagagcagagaggacACTCACCTGTCCTGAGATCTGTCTGATCTGTGACTCTGTCTGCTCACTGTTAGACCAGTAGGATCTTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250726 True 1111 lncRNA 0.50 7 16857391 16864206

Neighbor

gene id symbol gene type direction distance location
gucy1a3 gucy1a3,LOC107572203,LOC107695445,LOC107700279,LOC107598251 coding downstream 30037 16804577 ~ 16827354 (-)
gucy1b3 gucy1b3,LOC107714654,LOC107757623 coding downstream 58643 16765427 ~ 16798748 (-)
fabp2 fabp2,LOC108434304,LOC107714631,LOC107572697,LOC107700317,LOC107695844 coding downstream 100492 16750652 ~ 16756899 (-)
trnar-ccu_39 NA coding downstream 214660 16642659 ~ 16642731 (-)
trnaq-uug_3 NA coding downstream 214788 16642531 ~ 16642603 (-)
npy2r npy2r,LOC107700264 coding upstream 6811 16871017 ~ 16874481 (-)
fhdc1 fhdc1 coding upstream 178669 17042875 ~ 17059662 (-)
LOC103033731 arfip1,LOC108260818,LOC108434328,LOC107745866 coding upstream 224948 17089154 ~ 17113139 (-)
sfrp2 sfrp2 coding upstream 253846 17118052 ~ 17124751 (-)
LOC103027395 ptprdb,LOC107754148 coding upstream 565756 17429962 ~ 17501430 (-)
G185027 NA non-coding downstream 24614 16832466 ~ 16832777 (-)
G184993 NA non-coding downstream 153898 16647410 ~ 16703493 (-)
G185012 myoz2,LOC107695402,LOC103360806,LOC102203409,LOC100711322 non-coding downstream 156083 16699724 ~ 16701308 (-)
G185000 NA non-coding downstream 175534 16677975 ~ 16681857 (-)
G184998 NA non-coding downstream 182382 16674125 ~ 16675009 (-)
G185041 fgg,LOC106602564 non-coding upstream 56830 16921036 ~ 16922494 (-)
G185073 NA non-coding upstream 101803 16966009 ~ 16969764 (-)
G185079 NA non-coding upstream 167925 17032131 ~ 17032392 (-)
G185280 NA non-coding upstream 340535 17204741 ~ 17216109 (-)
G185328 NA non-coding upstream 493222 17357428 ~ 17360299 (-)
smim14 smim14 other downstream 1185437 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 1476183 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 1516811 15309509 ~ 15340580 (-)
trnas-gcu_6 NA other downstream 2765801 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 2767604 14089706 ~ 14089787 (-)
lrat lrat other upstream 33972 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 365879 17230085 ~ 17241027 (-)
G185295 NA other upstream 388061 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 431295 17295501 ~ 17300782 (-)
nutm1 NA other upstream 449164 17313370 ~ 17328889 (-)

Expression


Co-expression Network