G185079


Basic Information

Item Value
gene id G185079
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 17032131 ~ 17032392 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250784
tgatgatatgtttctgataactggttaaaaatacacgtctctgaatcaaaacacacagtttaaacccactgtgattaataaactgcagctgtgttagtgagttagtttaacttaaattaattagatagggagtcagggttaaagaaaaaaatatatatatgtaatgttcaacttgacctgtacctgatcagctaatcactatttcattttcaaactgtttattaatttaggattgcaggacttagtgtgagctataatgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250784 True 262 lncRNA 0.31 1 17032131 17032392

Neighbor

gene id symbol gene type direction distance location
npy2r npy2r,LOC107700264 coding downstream 157650 16871017 ~ 16874481 (-)
gucy1a3 gucy1a3,LOC107572203,LOC107695445,LOC107700279,LOC107598251 coding downstream 204777 16804577 ~ 16827354 (-)
gucy1b3 gucy1b3,LOC107714654,LOC107757623 coding downstream 233383 16765427 ~ 16798748 (-)
fabp2 fabp2,LOC108434304,LOC107714631,LOC107572697,LOC107700317,LOC107695844 coding downstream 275232 16750652 ~ 16756899 (-)
trnar-ccu_39 NA coding downstream 389400 16642659 ~ 16642731 (-)
fhdc1 fhdc1 coding upstream 10483 17042875 ~ 17059662 (-)
LOC103033731 arfip1,LOC108260818,LOC108434328,LOC107745866 coding upstream 56762 17089154 ~ 17113139 (-)
sfrp2 sfrp2 coding upstream 85660 17118052 ~ 17124751 (-)
LOC103027395 ptprdb,LOC107754148 coding upstream 397570 17429962 ~ 17501430 (-)
rbm47 rbm47,LOC107702361,LOC107754149,LOC107746010,LOC107656158 coding upstream 573713 17606105 ~ 17652838 (-)
G185073 NA non-coding downstream 62367 16966009 ~ 16969764 (-)
G185041 fgg,LOC106602564 non-coding downstream 109637 16921036 ~ 16922494 (-)
G185033 NA non-coding downstream 167925 16857391 ~ 16864206 (-)
G185027 NA non-coding downstream 199354 16832466 ~ 16832777 (-)
G185012 myoz2,LOC107695402,LOC103360806,LOC102203409,LOC100711322 non-coding downstream 330823 16699724 ~ 16701308 (-)
G185280 NA non-coding upstream 172349 17204741 ~ 17216109 (-)
G185328 NA non-coding upstream 325036 17357428 ~ 17360299 (-)
LOC111195245 NA non-coding upstream 338360 17370752 ~ 17429772 (-)
G185317 supt16h,LOC106577942 non-coding upstream 359479 17391871 ~ 17393833 (-)
G185318 supt16h non-coding upstream 362861 17395253 ~ 17397947 (-)
lrat lrat other downstream 130447 16898178 ~ 16901684 (-)
smim14 smim14 other downstream 1360177 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 1650923 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 1691551 15309509 ~ 15340580 (-)
trnas-gcu_6 NA other downstream 2940541 14091509 ~ 14091590 (-)
LOC103032582 NA other upstream 197693 17230085 ~ 17241027 (-)
G185295 NA other upstream 219875 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 263109 17295501 ~ 17300782 (-)
nutm1 NA other upstream 280978 17313370 ~ 17328889 (-)
G185321 NA other upstream 297626 17330018 ~ 17331954 (-)

Expression


Co-expression Network