G185373


Basic Information

Item Value
gene id G185373
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 17699354 ~ 17700407 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU251199
tctGATTAAAATATTACCAAGAGGGGAGGCAAGAATCATTTATTGGCAATGTGACAGGACCCAAGCAAGTGCCACATTTCCTCAATTACAAATACAACCAACTGAAATTGGAATGAAACTAGACAATCTGGCAACACAGCGTCAGTGGACACTGTAAACTTCACATATTTCCCCTTTTAGTTTGTCTCGTGTTTCTACATAACGGTCAAATATCACTGTAGAGCACAACAGCACAGTGCTGTAACTAACTAATTCAGggcttagccaatcacatttgCTAAACAAATAGTCTCTCTATATAGTGCACTACTAATTAGGGAGTAAAGGTCAATTTCAGTCACagcctttttatgttttttaacctCACATGAGCTCATAAACCGAGTGCATATACCCTTccaaggaagaaaagaaaaaatatatatattcctggTATGTTGAACCATCATACATAATTTCACCCATAAAACTAATGGAATATGCTCACACTATATAACAGCACTCCTTAGGTTGTGTGGGACCTTTCTTCTGGTGGGAGGGGGAGCATTGGAGCAGCACCACATACATAAGTGTACATAAAAGTGTGGAACTGTCATGGTAATTACCTTAGGTACGATGTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251199 True 622 lncRNA 0.39 2 17699354 17700407

Neighbor

gene id symbol gene type direction distance location
lap3 lap3,LOC107754151,LOC107656223,LOC107551587,LOC107702362,LOC107746009,LOC107591534 coding downstream 23914 17663351 ~ 17675440 (-)
rbm47 rbm47,LOC107702361,LOC107754149,LOC107746010,LOC107656158 coding downstream 46516 17606105 ~ 17652838 (-)
LOC103027395 ptprdb,LOC107754148 coding downstream 197924 17429962 ~ 17501430 (-)
sfrp2 sfrp2 coding downstream 574603 17118052 ~ 17124751 (-)
LOC103033731 arfip1,LOC108260818,LOC108434328,LOC107745866 coding downstream 586215 17089154 ~ 17113139 (-)
LOC103024973 LOC108434356,LOC108260969,LOC107746005 coding upstream 8444 17708851 ~ 17737741 (-)
LOC103045226 NA coding upstream 67973 17768380 ~ 17772217 (-)
LOC103031730 LOC108442776 coding upstream 74852 17775259 ~ 17782640 (-)
LOC103024247 NA coding upstream 143021 17843428 ~ 17847928 (-)
LOC103024551 LOC108442773 coding upstream 154147 17854554 ~ 17876383 (-)
G185367 clock,LOC108434354,LOC107573987,LOC108260793 non-coding downstream 11648 17683587 ~ 17687706 (-)
G185366 clock,LOC108260793,LOC107701480 non-coding downstream 18325 17678095 ~ 17681029 (-)
G185354 NA non-coding downstream 131539 17567279 ~ 17567815 (-)
G185346 NA non-coding downstream 177186 17521374 ~ 17522168 (-)
G185345 NA non-coding downstream 181082 17516486 ~ 17518272 (-)
G185386 NA non-coding upstream 62543 17762950 ~ 17764371 (-)
G185380 NA non-coding upstream 73247 17773654 ~ 17774182 (-)
G185378 NA non-coding upstream 83460 17783867 ~ 17825031 (-)
G185389 NA non-coding upstream 106680 17807087 ~ 17881087 (-)
G185393 NA non-coding upstream 188966 17889373 ~ 17892265 (-)
G185321 NA other downstream 367400 17330018 ~ 17331954 (-)
nutm1 NA other downstream 370465 17313370 ~ 17328889 (-)
G185311 emc4 other downstream 398572 17295501 ~ 17300782 (-)
G185295 NA other downstream 444721 17252267 ~ 17254633 (-)
LOC103032582 NA other downstream 458327 17230085 ~ 17241027 (-)
kiaa0368 kiaa0368,LOC107702367,LOC107551559,LOC107656759 other upstream 318315 18018722 ~ 18050369 (-)
apela NA other upstream 322715 18023122 ~ 18097691 (-)
G185890 LOC108443824 other upstream 2247675 19948082 ~ 19951796 (-)
LOC111195252 LOC108260666,LOC108412153 other upstream 2417019 20117426 ~ 20127092 (-)
G185943 NA other upstream 2870782 20571189 ~ 20627262 (-)

Expression


Co-expression Network