G185619



Basic Information


Item Value
gene id G185619
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 19216981 ~ 19217727 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU251565
TTGACGCTGAGACTTTTTCTCGCCTCTCAGTACGGCGCTGTCTCTCGGCTGGAAAAGCCCCCCCCATACTGCGCTCGCCGAGCTGAACTCCGCCTGCCTGTCCACCCAACTGAAAGCTCTCTCGCTCAGGTGAGCTCaggtgcctctctctctctcgcgcttcCAAAAAGGAAAGAAATGTTCCCGCTGAATTATTGAAGAACCCTGAGCTCTCCATCTCGAGGTTCCGCTAACAACCAACCAGAAAAAGGAGTAGATTTCAGAAAGctgcagctgatctgtgggttGTGGTTCACCTGATAATGTAGATGTGAATTAGGGAAGtatgataaataatatttatagcaTTACTGTTATATGAGCGAGGCAGAGTAAGGtttagtgaggtagagcaaggtagaatgAAGTACAGCTAAATaaaagtgaggtagtgtgaggtaaagtgaagtaggatgagGTAGAGCTAGGTAGAGc

Function


NR:

description
PREDICTED: ribosomal protein S6 kinase delta-1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU251565 True 474 lncRNA 0.47 2 19216981 19217727

Neighbor


gene id symbol gene type direction distance location
col19a1 col19a1,LOC107747287 coding downstream 472379 18577054 ~ 18744602 (-)
LOC103045151 col19a1 coding downstream 645272 18534127 ~ 18571709 (-)
fam135a fam135a coding downstream 734810 18442416 ~ 18482171 (-)
LOC103046077 LOC108415085 coding downstream 797061 18394203 ~ 18419920 (-)
tarbp1 LOC108416131 coding downstream 826948 18357879 ~ 18390033 (-)
LOC103035966 NA coding upstream 153334 19371061 ~ 19374831 (-)
LOC103034392 LOC108443823 coding upstream 704616 19922343 ~ 19940651 (-)
LOC103042714 eml5,eml6,LOC106608004 coding upstream 735395 19953122 ~ 20020037 (-)
LOC103033421 sptbn1,LOC108414519,LOC108260989,LOC105890945 coding upstream 804692 20022419 ~ 20108015 (-)
slc30a6 slc30a6,znt6 coding upstream 963186 20180913 ~ 20214951 (-)
G185606 NA non-coding downstream 298686 18917368 ~ 18918295 (-)
G185563 NA non-coding downstream 476448 18657719 ~ 18740533 (-)
G185555 NA non-coding downstream 676088 18540297 ~ 18540893 (-)
G185556 NA non-coding downstream 679411 18536414 ~ 18537570 (-)
G185458 kcnk1,kcnk1b,LOC108415485,LOC107654970,LOC107705375,LOC107680317,LOC107553189,LOC107602917 non-coding downstream 968099 18244029 ~ 18248882 (-)
G185627 NA non-coding upstream 41415 19259142 ~ 19259938 (-)
G185629 NA non-coding upstream 138580 19356307 ~ 19356563 (-)
G185635 NA non-coding upstream 187258 19404985 ~ 19412986 (-)
G185654 NA non-coding upstream 348435 19566162 ~ 19568196 (-)
G185671 NA non-coding upstream 553596 19771323 ~ 19771547 (-)
apela NA other downstream 1119290 18023122 ~ 18097691 (-)
kiaa0368 kiaa0368,LOC107702367,LOC107551559,LOC107656759 other downstream 1166612 18018722 ~ 18050369 (-)
G185321 NA other downstream 1885027 17330018 ~ 17331954 (-)
nutm1 NA other downstream 1888092 17313370 ~ 17328889 (-)
G185311 emc4 other downstream 1916199 17295501 ~ 17300782 (-)
G185890 LOC108443824 other upstream 730355 19948082 ~ 19951796 (-)
LOC111195252 LOC108260666,LOC108412153 other upstream 899699 20117426 ~ 20127092 (-)
G185943 NA other upstream 1353462 20571189 ~ 20627262 (-)
LOC103028253 ndrg2,LOC108437864,LOC107574080,LOC107657174,LOC106577998 other upstream 1422611 20640338 ~ 20678614 (-)
G185990 NA other upstream 1530437 20748164 ~ 20752273 (-)

Expression



Co-expression Network