G185892


Basic Information

Item Value
gene id G185892
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 19969909 ~ 19996253 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU251921
CATGGTTTTCTCattttttgtCAGTGACTGTACATTAACAAaatccaggcctggaaactgGATACAAGGTCCAGGTTTCAAGACCTGGTTTCTGTGGCATCACTTGAAGAATcatttgaagcacctttattttgaaaacGTGTGGTGGGGGTGTATTGAAAACAAATAGGGAAACTAATGAAAATCTCCCAGTAAAAGCTTGCATGAGCTGATGAGCTGTCTGCAGTTCTTACAAATATCTTCAATATGTCTTTTAGTCCTATCATAAAGGCTGGGTAAAGGCCTTTTTAAAGCTGTGGCATGAACCCTCTtcgttttttctcatttttcaccTCATAATATTCACCATCATCTGCATCGTCAGCATTATTCGGACCCATGCCTTCTCATTGGCTTTCTCCGATGTCTCTCGTCCTGTCTTGTCTCTTGTCAAGATGTCCACTGACACAGTCTCTTTCCCTGTCTCTCCATGGCTCACCTTTCCAATAGTGCTCATTTCCCCCAGGGACTTCAGGGTATGACTACTTTTTGATCCGAGCGCAATCCAGTGCGCCCTTCCTCatccctccctcgctctctgAGCCGTTATCTCTCCAGCATGCTGAGAAACAGGAGAACGAATGAGCATGGTTTGCCTCGCACAGAGAATCAATGACTAGCTGTAGGGCTACAATGGTTAGTCAGTAGAATAAAATCGACAATGTCTCCAGAAAAAAGGTAAAGAGATTAAGAGTGAATTATTTGCGATTGGGTTTATAAaatacaggaaataaaaaaaatgtaattacagaTTATTAAAGGGTGGCTAACAACTTCAACAAATCTTGCTACTGtataacagcctaactaaattgaaagtgaaactgaagccagaaggtaacataaaCATGATTGTGCTGCATTAGTCTTCTTTATTctcaataaaaaacagcttccagtatttttcgcactataaggtgcacttaaaatcctttaatttaccccaaaattgtcagtgtgcccATTAACCCCTTGCTCCTTTTGTATGAATTGTACtgaagtacagatttatacaggagtttcagtttaggtcTCCAGCACTGGgactagagcagtattagcattagctgctaaccatgctaagcgctagctctttcaccattcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251921 True 1146 lncRNA 0.41 3 19969909 19996253

Neighbor

gene id symbol gene type direction distance location
LOC103034392 LOC108443823 coding downstream 29258 19922343 ~ 19940651 (-)
LOC103035966 NA coding downstream 595078 19371061 ~ 19374831 (-)
adgrb3 adgrb3,LOC107665593,LOC107736840,LOC107664175 coding downstream 697037 18950515 ~ 19272872 (-)
col19a1 col19a1,LOC107747287 coding downstream 1225307 18577054 ~ 18744602 (-)
LOC103045151 col19a1 coding downstream 1398200 18534127 ~ 18571709 (-)
LOC103033421 sptbn1,LOC108414519,LOC108260989,LOC105890945 coding upstream 26166 20022419 ~ 20108015 (-)
slc30a6 slc30a6,znt6 coding upstream 184660 20180913 ~ 20214951 (-)
LOC103041484 LOC108443830 coding upstream 248055 20244308 ~ 20269233 (-)
LOC107197720 NA coding upstream 275975 20272228 ~ 20281572 (-)
LOC111195146 NA coding upstream 286589 20282842 ~ 20287322 (-)
G185687 NA non-coding downstream 55739 19913912 ~ 19914170 (-)
G185671 NA non-coding downstream 198362 19771323 ~ 19771547 (-)
G185654 NA non-coding downstream 401713 19566162 ~ 19568196 (-)
G185635 NA non-coding downstream 556923 19404985 ~ 19412986 (-)
G185629 NA non-coding downstream 613346 19356307 ~ 19356563 (-)
G185934 NA non-coding upstream 356637 20352890 ~ 20378945 (-)
G185967 NA non-coding upstream 658352 20654605 ~ 20656786 (-)
G185974 NA non-coding upstream 703399 20699652 ~ 20701062 (-)
G185985 NA non-coding upstream 742437 20738690 ~ 20739699 (-)
G185986 NA non-coding upstream 742629 20738882 ~ 20739874 (-)
G185890 LOC108443824 other downstream 18113 19948082 ~ 19951796 (-)
apela NA other downstream 1872218 18023122 ~ 18097691 (-)
kiaa0368 kiaa0368,LOC107702367,LOC107551559,LOC107656759 other downstream 1919540 18018722 ~ 18050369 (-)
G185321 NA other downstream 2637955 17330018 ~ 17331954 (-)
nutm1 NA other downstream 2641020 17313370 ~ 17328889 (-)
LOC111195252 LOC108260666,LOC108412153 other upstream 121173 20117426 ~ 20127092 (-)
G185943 NA other upstream 574936 20571189 ~ 20627262 (-)
LOC103028253 ndrg2,LOC108437864,LOC107574080,LOC107657174,LOC106577998 other upstream 644085 20640338 ~ 20678614 (-)
G185990 NA other upstream 751911 20748164 ~ 20752273 (-)
LOC103038058 slit1 other upstream 767875 20764128 ~ 20916624 (-)

Expression


Co-expression Network