G186110


Basic Information

Item Value
gene id G186110
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 21395019 ~ 21395732 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU252285
CAGGAGTGTGACCTACATAGGGACACTGTGTTAAGGAGAGTCTAAAAGCTAAATAGTCTAGAGCTGCGAGAATGCGccgttgtagcgcagaaaacgggataaagagtctaaagcggcgagattgttcagttgtagcggaaATGACGAGACAAAGAGCCTAAAGCGGCGAGAttgttcagttgtagcggaaATAACtagacaaagagtctaaagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252285 True 215 lncRNA 0.46 2 21395019 21395732

Neighbor

gene id symbol gene type direction distance location
LOC103027134 tp53bp2 coding downstream 3011 21349559 ~ 21392008 (-)
kcnip2 kcnip2,LOC101469196,LOC106526488,LOC105900836,LOC106576844 coding downstream 121192 21136762 ~ 21273827 (-)
LOC103026251 NA coding downstream 286985 21059184 ~ 21108034 (-)
LOC111195255 LOC107558209 coding downstream 342351 21036881 ~ 21052668 (-)
arhgap19 arhgap19 coding downstream 454587 20932530 ~ 20940432 (-)
LOC103024822 NA coding upstream 133729 21529461 ~ 21532413 (-)
LOC103024095 lgi3,lgi1a,LOC108260544,LOC107701579,LOC107565913,LOC107753733 coding upstream 206284 21602016 ~ 21618998 (-)
ffar4 NA coding upstream 228708 21624440 ~ 21628770 (-)
LOC111195258 NA coding upstream 233870 21629602 ~ 21636692 (-)
G186096 NA non-coding downstream 46748 21346360 ~ 21348271 (-)
G186031 NA non-coding downstream 264842 21126219 ~ 21130177 (-)
G186022 NA non-coding downstream 276587 21114162 ~ 21118432 (-)
G186026 NA non-coding downstream 288734 21106067 ~ 21106285 (-)
G185976 NA non-coding downstream 468379 20919092 ~ 20926640 (-)
G186136 NA non-coding upstream 41075 21436807 ~ 21445436 (-)
G186175 NA non-coding upstream 93161 21488893 ~ 21489095 (-)
G186180 NA non-coding upstream 116889 21512621 ~ 21517622 (-)
G186186 LOC108414040,LOC108271264,LOC107698240 non-coding upstream 157674 21553406 ~ 21577296 (-)
LOC111195157 NA non-coding upstream 253874 21649606 ~ 21652310 (-)
LOC103038058 slit1 other downstream 478395 20764128 ~ 20916624 (-)
G185990 NA other downstream 642746 20748164 ~ 20752273 (-)
LOC103028253 ndrg2,LOC108437864,LOC107574080,LOC107657174,LOC106577998 other downstream 716405 20640338 ~ 20678614 (-)
G185943 NA other downstream 767757 20571189 ~ 20627262 (-)
LOC111195252 LOC108260666,LOC108412153 other downstream 1267927 20117426 ~ 20127092 (-)

Expression


Co-expression Network