G186186 (LOC108414040,LOC108271264,LOC107698240)


Basic Information

Item Value
gene id G186186
gene name LOC108414040,LOC108271264,LOC107698240
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 21553406 ~ 21577296 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU252385
AGGCTTCCTGCCCAATAGGAGATATGTAGCCATGACCTCATCGTATTTCTGTCCTATAAGAGCCTCTGTGATGTCATCCTTCGGGAATCCCATCGTCACCATCAGCTCGATCCTCTTGGTGTCGTTAAAATCAGCCTCTGGTTCCGAGTACGGCgtcagctcctcctcctcatgcCCGACGttcatccatctatccttcATGATTTGCTCTAAACTTCCTCGTTTAACAGGGTTTAACACCAGCAGCCTCTTCAGCAGGTTCTCACAGTCTGTGGACATGTAGAACGGTATACGGTACTTCCCTCTCAGCACTCGCTCCCTCAGCTCCTTCAGGTTCTGTCCGTCGAAAGGCAGAGATCCGCTGACCAGCGTGTAGAGAATCACCCCCAAACTCCACACGTCCACCTCCGGCCCGTCGTACTTCTTACCCTGGAACAGCTCGGGGGCGGCGTACGGAGGACTCCCGCAGAACGTGTCCAGCTTACTGCCCAGAGTAAACTCATTACTGAACCCGAAATCTGCGATCTTAATGTTCATATCAGCGTCCAGTAACAAGTTCTCAGCCTTAAGATCCCTGTGTACTATCTTCTTCTGGTGGCAATACTGCACTGCAGATactatCTGTCGAAACTTCGCTCTGGCCTCCTTCTCCTTCATCCTGCCGTGAGCCACCAAATAGTCGAACACTTCACCTCCACTGGCGTATTCCATTACTAAATAAAGTGTCTTCTCTGTTTCAATAACTTCAAATAACTtcaCTATATTAGGATGATTCAAGATCTTCATTATTCGGACTTCTCTAAACAgCTTTTGTAGACTAGTGGGATTCAGCTGTGTTTTGTCTATTATCTTGACGGCCACCTCTCGTCCGGTGAGGACGTGGCGAGCCAGCTTGACTTTGGCGAAGTTTCCCTTGCCGATGGTTTTAAGCAGGCGGTAGCTGCCGACATGAGGATGCTCATCCacgctggagctcagtgagctCCTGCACCGCGGGAGGCTGGTTCTGCTCACCGATTTGGCGGGAGGTACGGGTGCCTCCGGAAAACCATCCAGGGAAGTGTGCTGAGGATAAGAGGAGGCAGCATGGTTAGAACCTGATTGAAGAC

Function

NR:

description
PREDICTED: serine/threonine-protein kinase MARK1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252385 True 1109 lncRNA 0.51 10 21553406 21577296

Neighbor

gene id symbol gene type direction distance location
LOC103024822 NA coding downstream 20993 21529461 ~ 21532413 (-)
LOC103027134 tp53bp2 coding downstream 161398 21349559 ~ 21392008 (-)
kcnip2 kcnip2,LOC101469196,LOC106526488,LOC105900836,LOC106576844 coding downstream 279579 21136762 ~ 21273827 (-)
LOC103026251 NA coding downstream 445372 21059184 ~ 21108034 (-)
LOC111195255 LOC107558209 coding downstream 500738 21036881 ~ 21052668 (-)
LOC103024095 lgi3,lgi1a,LOC108260544,LOC107701579,LOC107565913,LOC107753733 coding upstream 24720 21602016 ~ 21618998 (-)
ffar4 NA coding upstream 47144 21624440 ~ 21628770 (-)
LOC111195258 NA coding upstream 52306 21629602 ~ 21636692 (-)
G186180 NA non-coding downstream 35784 21512621 ~ 21517622 (-)
G186175 NA non-coding downstream 64311 21488893 ~ 21489095 (-)
G186136 NA non-coding downstream 107970 21436807 ~ 21445436 (-)
G186110 NA non-coding downstream 157674 21395019 ~ 21395732 (-)
G186096 NA non-coding downstream 205135 21346360 ~ 21348271 (-)
LOC111195157 NA non-coding upstream 72310 21649606 ~ 21652310 (-)
LOC103038058 slit1 other downstream 636782 20764128 ~ 20916624 (-)
G185990 NA other downstream 801133 20748164 ~ 20752273 (-)
LOC103028253 ndrg2,LOC108437864,LOC107574080,LOC107657174,LOC106577998 other downstream 874792 20640338 ~ 20678614 (-)
G185943 NA other downstream 926144 20571189 ~ 20627262 (-)
LOC111195252 LOC108260666,LOC108412153 other downstream 1426314 20117426 ~ 20127092 (-)

Expression


Co-expression Network