LOC103024822


Basic Information

Item Value
gene id LOC103024822
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 21529461 ~ 21532413 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239829.3
AAGGCTGAAATGGATTGGTTATTGCCTGTTGGTTTTGGAAGTAATGTGTATCTTGCTTGTTTGGCTGTGTTTATATGCCTGTTGAAAGATGAAGAGGTcctatttatttttcatgttttttcttctctggGAAAGTGCTAGAGGATTTGGAGTTTGGAATGAACTGCCTGCTCAAATCTGGCATCGTAGTGAGGAGAAAACCATTCAAGATCCACCTTCTCTTTCTTCTGAGCAGCAAGCCAATAGTGTTCCAAGTGGAGTCCAGTCCATTGAGCATGAAGCCACAAACTCTGATGGTTCAAGAAACGCACCTACAAGGCATGTCCGATTAAAACCCAACGGTCTGGGTGTTTCCTCCTTTGGCGACGAACTCTATGCAACTGATGCCCAAAGTGCTGGGAGACCGTCTTCTCCTACTCCGGGTTTCCAAAGTCCTCGTccatcaaaacattttattttatcttctcCTAGGAGACTGTACCCTTCGAGTCTTGTGGGCTTGCCAGCGAGGGACTCTCTATTGCTTCAGCAAAATGGTTATTCAAGTGGTTTTGCTTCTGGAAGACCAAGCACCCAAATGCCACctcacaatgctaacaatgctttTCAGTCTATGTGGTCACAGGTGCTgagcagccaatcagctagTAGGCCTACATTCCAATCCTGGATGTCAAACCTTGTGGCCCCATCCAACGGTTTCATAAGCAATACATTTTCATCTCCGCCAGACCATATTGGGAATGACCTCTCAGGTTATTCAAATGGTTTGTTTTCTGCAAGAAAAGGCAGTCAAACACAGTATGACCCTCCACTTCAAATCCAGAAATCCAACCGTGTGGCCACATTCCAGAATTCAGGAAGCACATCTCTGCCATTACAGCAGGCTGGGTATAGTGATCAGTCAAAAAAAGACTGGCTAGAGGTGAAGAGAATCCCATTTGGTAGTGAGGCTCCATCCCAGAGTTTAGGACGTGTACCAGTGCAATCACAGCAAGATAACTATGGCATTCCATCTAAATGGTCTGCTTTTCAGTTGCAGGGCATCCCCTCAGCTTCTCGACCTGCACTACAGACCCAGCCTTCAGATTTTGTGGCCCCCTCACGTACTGTAGGAAGTGCTCCAGTGCCATCACAAGAGGACAATCTGGCTCAACCTGCTTTAGAGGTACAGAGAATCCTATTAACTAGTCGGCCAACATCCCAGGCCCAGTCTTCAAACTTTCTGACCCCATCCCAAATTTCAGGAAGTGCTCCAGTGCCATTACAGCAAGATGGCTATGGTATTCCATCATGGTGGTCTACTCCACAGGTACAGGGCATCCCCTCAGTTTCTCAGCTTGCACTAAAGAAACAGCAATCAAACCTTGTAGTGCCATCCCAGAGTTTAGTAAGTGCACCAGTGCCACCATGGCAAGAAAGCTATGGCATGCCCTCTAGGTGGTCCTCTTCACAGGTACAGGGCATCCCCTCAGCTTCTCGGCCTTTGCTACAAAACCAACCTTTAAATTTTGTACTCCCATCCCAGAGTTTAGGAAGTGCACCAGTGCCATCACAGCAAGATGGCTATGGTATTCCATCATGGTGGTCTGCTCCAGAGGTCCTCCCGTCAGCTTCTTGGCCTGCACTACAGACCCAGCCTTCATATATTCTGGCCCCATCCCAGGGTTTAGGAAGTGCACAACTGCAATCACAGCAAGATCGTGATGGCTTTCAGTCTAGATGGCCTGCTGCAGAAATTAAGAGTATCTTCTTAAACAGGCCCAGGTTCCAGAATCAAGCATCAAACCTTGTGGCCCCATCCCAGAGTGTAGCAGTTTCACCACAGCCGCTACAGGAGGATCGATATGGCTTTCAGTCTTGGAGTTCTGGCTTACAGATGCAGGGCATCCCATCAGCTACTTTGCCTGTGCTTCAGACACAGCCATCAAACCTTGTCGCCCCATTCCAGAGTTTAGGAAGTGCACCAGTACCATCACCGCAAGATGGCGACAGCTTTTACACTAGATGGCCTGCTGCAGAAATTCCAAATGTCCCATCATCTGCTCAGCCTATATTCCAGGGCCGTTTATCAGACATTGTGGCTTCACATGAGCATTTATCAGGTGCTTCTCTACCATCGCAACACAATCGCTATGGTCCTGAGTCTAGTTTCTTTAATTCAAAGGAGCAGAATATCGCTCGGCCTAGGTGGCCTGAACGAGTCCCCTCAGCTAGTCAACCTCCCCAGTTTGGCCCAATGTTTCAAACCCAGGCATCACAGGAAAGAACCAGTGTGTTTAGTTCTCTTTCTCAAAACCAGGCCAGAGTTGACCCTTCAGAACATGTTCTATGTTTTAAAGTGTCATCGGCTGCACTTGCTGATGCAGTGCAATCCAACAAGCCAGGGATCCAACCTCAGAGTTTGGAGAGTCTTCAGTATAACTCTACCGCTTCAAGCAGCCTTCCTTCCTCGTCTCAAAGTCAAAATGCCTCAGCTTTAACTGCAGCTCAAACTCAGAGTGGTGTCCAGTCTCCAGCTGTTAACCATAGTAGTTTTCTTCCCTCATCCCAGACACCAGCCAACTCGACAGCTTCTGCGGCCGAAAGTGTTTCTACACCCCCCGTCCAGACTTCTGCTGAACACCTCGCCTCAGACCTCAGCAAACAGATCCCAGTTGATGTGTGGACTGAGCTAACCGAACGTGATCTTGATTAATAACAGTTTCAAATGTCAAGCTCAAGcaactgcacattttatttgtgaAGCTGTTTTGTCTTTAATAAAGGCGATTCTGACAATCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239829.3 True 2786 mRNA 0.47 3 21529461 21532413

Neighbor

gene id symbol gene type direction distance location
LOC103027134 tp53bp2 coding downstream 137453 21349559 ~ 21392008 (-)
kcnip2 kcnip2,LOC101469196,LOC106526488,LOC105900836,LOC106576844 coding downstream 255634 21136762 ~ 21273827 (-)
LOC103026251 NA coding downstream 421427 21059184 ~ 21108034 (-)
LOC111195255 LOC107558209 coding downstream 476793 21036881 ~ 21052668 (-)
arhgap19 arhgap19 coding downstream 589029 20932530 ~ 20940432 (-)
LOC103024095 lgi3,lgi1a,LOC108260544,LOC107701579,LOC107565913,LOC107753733 coding upstream 69603 21602016 ~ 21618998 (-)
ffar4 NA coding upstream 92027 21624440 ~ 21628770 (-)
LOC111195258 NA coding upstream 97189 21629602 ~ 21636692 (-)
G186180 NA non-coding downstream 11839 21512621 ~ 21517622 (-)
G186175 NA non-coding downstream 40366 21488893 ~ 21489095 (-)
G186136 NA non-coding downstream 84025 21436807 ~ 21445436 (-)
G186110 NA non-coding downstream 133729 21395019 ~ 21395732 (-)
G186096 NA non-coding downstream 181190 21346360 ~ 21348271 (-)
G186186 LOC108414040,LOC108271264,LOC107698240 non-coding upstream 20993 21553406 ~ 21577296 (-)
LOC111195157 NA non-coding upstream 117193 21649606 ~ 21652310 (-)
LOC103038058 slit1 other downstream 612837 20764128 ~ 20916624 (-)
G185990 NA other downstream 777188 20748164 ~ 20752273 (-)
LOC103028253 ndrg2,LOC108437864,LOC107574080,LOC107657174,LOC106577998 other downstream 850847 20640338 ~ 20678614 (-)
G185943 NA other downstream 902199 20571189 ~ 20627262 (-)
LOC111195252 LOC108260666,LOC108412153 other downstream 1402369 20117426 ~ 20127092 (-)

Expression


Co-expression Network