LOC103031161


Basic Information

Item Value
gene id LOC103031161
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 4853649 ~ 4876273 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681689.1
acacacacacacacacaggcagaagATCCACAGAGTTTACAGTCACACTCATGTGGAGTCGGATGGACACAGTCTAAACCACAGAGCAGCAAGAGAACCCTGGACTATTCGTAGAAgatttaaacctttaaactgTGGGAATATCGGAGTATATTGAGTTTCTTTTAATTGATGGACCTCCTTTATGTGAATTTACAcgttttttagatgttttttgagaaaaaaaaaacccaggcTGGACTTTTGGGTCTTCCAACGTTCCAACATTTCTTCTGTTCTCCATCTTCGTTCtgtttactgattttttttccacaatccAACAAAACTGGGAAAATCTACAGTGTGGAGTTACCGTTACAGTTCTCAAGACCTTCTGTTGCTTCTGGGATCTGTTCTGAACAGACGGTTTGGATTTAAAGCTTGTGGATTGCTTTTCTTTCAAATTTAATGTCTCTCTTCAGCTAGATTGAAGGATTTTCCCGTTCATTTCAGGACATCCCCGGACTCACCATGCTGATCTGTTGTGCCACGGTTCTGCTGGCACTCTTCGGGCCGATGAGATGCGACTACAGCAGTAATGTGACGGAACCGCAGTACGCCGGACTGAGGAAGGAACCAAGTCAAGCTACAATAGAGGCGTGTCTGCAGGTGGCTCCTCCCTGTGTGACGGAGGCGGACCACTTCAGCCTGGAGGCTCTGCGACTCATCCACCGCGAGATGGATGATGATCAGGATGGAGGGATCGAGGTGGAAGAGAGTGTAGAGttcATCATTGAAgacatgcagcagcagcagcagaccaaCAAACACAGTAAACTGCACAGAGAAGACCAGCATATCACAGTGGAGGAGCTGTGGAGAGGCTGGAAGTCCTCAGAagttcataACTGGACTCAGGACGATGTCCTGCGCTGGTTACGGGAGTTTGTGGAGTTGCCTCAGTACGAGAAAAGCTTCAAGGAGATCCGCGTCAATGGAAACACCCTGCCCAGGATTGCTTCCAATGAGCCGTCATTCATGAGTGGCTACCTAAAGATCCAGGACCAGCAGCATAAACACAAGCTGAAGCTCAAGGCGTTGGACGTCGTGCTGTTTGGACCACCCACACGGCCACCACACAACTGGATGAAGGACCTGGTGCTGATCGTTTCTGTGGTGATGGGCGTGGGAGGCTGCCTGTTTGCTCAGGCTCAGAATAAAACATCCAAAGAGCACATCTCCAAGATGATGAAGGATCTGGAGAGCCTTCAGAGAGCAGAGCAGCGTCTGAGAGACCTGCAGGAACAGCTGGTGCAGGCGCAGGAGGAGAAGCGGACAGTAGCGGTAGAAAAGCAGTTTCTGGAGGAGAAGATGAGGGATGAAATCCAGGGAGCTCAGGAGGAGGCTAACCGGCTTCAGGAGCTCCGGCAAGGGGCTGTAAGCGAACTGAGCCGCCTCCGCTACGCAGAGGAGGAACTGGAACAGGTTCGAGGGGCGCTGAAGAAGGCAGAGCTGGATATGCAGGCCTGCTGGTCAGTGCCCGAGTCTCTGCAGCTGTGGCTGCAGCTCACCCATGAGGTGGAAGTGCAGTACTACAACGTGAAGAAGCAGAGTGCTGAGCAGCAGCTGTGCACCGCCAAAGAGGAGGCAGAGAAGATTAAGAAGAAGAGGAGCTCTGTTCTGGGCACGCTCCATGTGGTACACAGTTCCTCTTTGGATCAGGTGGACCACAAGATCTTAGAAGCCAAGAATGCCCTGGTGGAAGTGACAGCATGTCTACAAGAACGTCTGCATAGGTGGCAGCAGATTGAGTGGCTGTGTGGGTTTCTCGTAATGAAGAACCCCGGGCTGCCCAGCCTCACGGCCACCCTGTACCCTGACCCCAACTGGATGCTCCTTCCGAGATCTGCCATGTCTTCCTACCAAATGCCCGCAGGTGTAGATGACATGGAGGACAGCATGCCCTCTGTGATGCCGCAGATTCCTGTTACTGTGAAAGCTCCAATAAAGCTGTCCCCTCGTGCAGTGGTCCGTTCTCGCCGAACCGGCCACATCGTCCCGTCGCCTGTAGTTCTGTCACCTGATCCAGACCTGCTAATCCCGATCCGGGGCCCGATTCCTAGATACGGAGAGGATGAGGGAGAGCGAATCATTTTCCCGACTCTTATGAAACAGGAATGCATGGAGACAGCTCCAGACCCAGAGTCCACCATGGGCCGACTGTACCCAGGCACTGGCTTGGATACTCCACCTCGAAGACTATACCGCGAAGACTACGCCAGTAGCATCACACGCAAGGTCTCTTTTGAGGAACAGGAAGAATCTCCTTCGCGCAAAATCTCCCGAGAGGACCTTGGGGACTCTCTGAGGGCCACCTCCAGAAAATTCCTGCCGGATGAACTTGCTGTGGAAAATCCAGTCAGAAAGACATCCAGAGAAGAACTGGAGGCATCCGGGGAGACTTTGATGAGTCCTATGGGTACAGAGGAAGCAGATTCCAGAAAAGTAGCAAAGAGTTCTCCGGTTGATATTACCGATTCTTCTTTAAGATCTTCTACCAGAGACAAGTTAGAACCTGTGATTGAGCAGTATCTGTCCACTCAAAGACGCACAGCCTTTAAAGAGAGGAAGAATCCCTCAAAAGACAGCCTTTCCAGAATGATGTTAGGAGATGAAGGTTGTACGGATGTTCAGACAGGAACTGCAGGTCTGGATGCTGATGTGTTTGAGGTGGACAATGCTTCAAAGATGATGTCTGTTGAGGACAGTGGCGCTTCAGTGGAAGCCAAAGCTGGAACGCTGTTGAAGGACCTATCGAGAGATGAGTTTGATGTCTCAATGGATTTCCCGGCCAAGATATTTAAAGACAAAGACAAGTCTTCCAGAAAGATTCTTCAAGGGGAACTAGACCAGTCCATGATGCCGGAGAAGGGACAGATCTTTAGAGGTGCTTCAATGGACAGTATTTCTAGGAATAAGATGTTCGAGACAGTGGACCCCCGTAGAGGAATGTCCTTAAAAGAGCGAAGAGGGGATCCTGCTAGCGCTTCCAGGAAATTTTCCAGAGAAGAACGTGATGTTGCCACAGAAAGACGCCGACTGTTCAGGGACTTCAGGACGGAAAGTTCTGCAGACCCAGCCACAGAGGCGCAGAAACTCCAGCGAGATATGCCCATGCCTGTGGAGTTTACCAGACGCAAGATTTCCAGAGAAGAGTTCCCAGTTGCAGACCCAGGCTCCTTAAGCCAACCAGACCTCACGTCATCCTCCTTCATGCTGTGGGCTCCACCCCAAGAGCTGCTAAGCCATCTAGTCTACGATGGAATCTTAGAGAAGTCTTACCAGAACCCTCTCAATTCACCCTTTCCTGGAGATCGCGATTCTACAGCCTCAATGTCTGCCTCCTCCCAAAGCCTTGCTGCTAGCGAAGCTTCTGTACGATCTGACAATGCTTCGCCACCAGAGTCCAGTAGTGGAGAAAAAGTGAAGAAGCCCTCAAAGCTCAAGAGCCTgtttaagaaaaagaaagataaggAGAAAGACAAGGAACCAACTGGAGATAGTCTACAAGGCGGCCTGCAGAAACTTTGAAAGCAATTACAAGAGGAACCCaatgtacatactgtattttagcACTGTTGGTTTTAATGAAGACTGTTTAACGAAGACTTCTGAGATACACCAGTCAAGCATCACAGCATCACAaccattatccattttttcaGCAATGCTGAGCATATGGGACACTTTGCACATTTGTATtgcagtatttatttttgtaggttcctcagtctactgcaatcaggtggcatttacgtcctgcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681689.1 True 3804 mRNA 0.50 13 4853649 4876273

Neighbor

gene id symbol gene type direction distance location
LOC103027755 NA coding downstream 21171 4819940 ~ 4832478 (-)
LOC103036327 LOC108415078,LOC107562921,LOC107702324 coding downstream 293729 4519130 ~ 4559920 (-)
hgsnat LOC108411545 coding downstream 375357 4440549 ~ 4478292 (-)
pi4k2b pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 coding downstream 416451 4423892 ~ 4437198 (-)
c21h4orf33 cunh4orf33,c29h4orf33 coding downstream 458062 4391791 ~ 4395587 (-)
LOC103029567 rbpja,LOC103029567,LOC108441335,LOC108260898,LOC107563830,LOC107742494,LOC105903551,LOC107562987,LOC107702317 coding upstream 14201 4890474 ~ 4904539 (-)
LOC103030845 LOC108441329 coding upstream 41861 4918134 ~ 4931683 (-)
LOC103030534 LOC108441328,LOC108260848,LOC105903575,LOC105020871 coding upstream 77539 4953812 ~ 4969692 (-)
LOC111195179 NA coding upstream 159804 5036077 ~ 5058756 (-)
LOC111195261 NA coding upstream 187827 5064100 ~ 5075191 (-)
G182706 NA non-coding downstream 2241 4850589 ~ 4851408 (-)
G182672 NA non-coding downstream 3657 4846885 ~ 4849992 (-)
G182671 NA non-coding downstream 4453 4848271 ~ 4849196 (-)
LOC111195163 NA non-coding downstream 59222 4793211 ~ 4794427 (-)
LOC111195177 NA non-coding downstream 337766 4513700 ~ 4515883 (-)
LOC111195178 NA non-coding upstream 6002 4882275 ~ 4889086 (-)
G182720 NA non-coding upstream 59337 4935610 ~ 4941127 (-)
LOC111195180 NA non-coding upstream 152849 5029122 ~ 5032848 (-)
G182820 NA non-coding upstream 222721 5098994 ~ 5099951 (-)
G182832 NA non-coding upstream 264534 5140807 ~ 5141055 (-)
G182501 NA other downstream 1303236 3547633 ~ 3550413 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other downstream 1399063 3395119 ~ 3454586 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other downstream 3141512 1585495 ~ 1712137 (-)
cisd2 cisd2 other downstream 4345585 494190 ~ 508064 (-)
LOC103026712 NA other downstream 4805355 45736 ~ 48294 (-)
LOC103027068 NA other upstream 230763 5107036 ~ 5109098 (-)
G182810 saraf other upstream 301103 5177376 ~ 5213151 (-)
LOC111195184 NA other upstream 409673 5285946 ~ 5295716 (-)
G183043 NA other upstream 1235097 6111370 ~ 6113092 (-)
tmsb10 NA other upstream 1475902 6352175 ~ 6408023 (-)

Expression


Co-expression Network