zcchc7


Basic Information

Item Value
gene id zcchc7
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 6150690 ~ 6237111 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681743.1
GCACACCTGTGTATCACACATACTGTAAACCTAGGAAAgggaaataaatgtatttccataACATTAAAGCCCTACactactgtctgtctgtctgtctgcatgaGACTGAACTGGTGGTGAACTCTCCTGTATGGGAGACAGCTCCCAGCGCTAGCTCACGGTCGGCCACCCTGTTTTCCTCCTACAGCCACGGAAGCCGCAGCGCTTCAAAACAGCGGAGTGTGATCCAGAAACAGggtGTTTCCTTGACATGTTCTCGGGGTACCAGGAGCGGGAGGAGTATGAAGATGAGCTGTACCGTGTGGAAGATGAAGAGGACTGCAGCTTGTCCGAGCTGGACAGTGAGCTGGAGTTTCAGCTCTACTCACAGCTCCACTATGGTGCTGAGGACCAGAACAACCAGGAGAATCGGGACAAGCAGCAGGGCAATGCGGACTCAGGCTCCGTTCACACTAAGGTTCCTCAGTCCATGCCAGGAAAGGAGCCCACTCCTCTGTCACCTCCAGAAATCATCACAATCGATTCCGGTCCAGACGTTATCCTGATCTCGGACAACACTGAGACCGAGGACAGCGTCTGCGCCATCAAAGGTAGAAGTgcaagcacaaaaaaacagcgTCACACTGCGTCTTCATGCCCTCCGCTAAGGAAAACGCCTGAGAACGAGGCGGGAGAGGTGGTAGTCGTGGAACTGGAATCAGACGAAAGTTCGGATTCAGACTCGGTTCCTCCTTTTGTGGcagatctggactctgtatcAGATTCAAATTCGGATTCAGATGGACTGGAAAACTGGATGCTTTTGGGAAAAGGAAAAGAGGCCGGAGATCAGAACATTCAGCTTAACCTTGCCGTAGAGGAGAACGAAGAACAAGaagACTTTGTAAGACATGAAGGTGGACCTCAGAACTGGACCGTCtcagacagagataaagaggcccAGATATTTAATAAAGGGCAGGGCGGAGTGCGGTTGGCGAACAGGTACTACTCCCCGAAGACGGTCACCTGCCATAATTGTCGCAGAGTTGGCCACCTCTCCAAAAACTGCCCCTCACAAAAGaaGCTGCCGTGTTGTTCGTTATGTGGTGTTCAGGGTCACTTTGTGAGGGCCTGCCCGAGTCGTCACTGCTCGAACTGCTTCCTGCCCGGTCACACGTACGACGACTGTCTGGAGAGAGCGTACTGGCAGAAGTGCTGTCATCGCTGCGGCATGACCGGACACTACATCGACCTCTGTCCAGACATTTGGAGGCAGTACCACATCACAaCTAGAGTGGGTCCCCCTGTGAAAGTTCCTAATCTGAAAGCCACGTCCCCTGCGTACTGCTACAACTGCTCGAAACGAGGACACTTCGGCCACgaATGTACCCAGAAGAGGATGTTTAACGGGACGTATCCCACGCTGCCGTTTGTCTCCGGCTACAACACCCAATGTGACCTCAGATACCTAGAGAACCGAGCCAGGAACTACGTGCAAGAGCTGCAGAGAGCTGGTTTATTAGAGCAgcgagaagaagaagaagctccTCCTCAAACTCCACAAACTCCTCAACCTCCCCGAAAGAAAcagaaacccaaccctaacaAAAACACGCTCTTCCCCTTCACGCCGACCGGACGCCCCCCGAAGAGACGCATCGCGCACACCCCCAAGCACCACCCTCAGACCACGCCTAAACAGAGTGCGTGGAAGCCGGCGCAGAAGAACACGCCCGTTCCACAGCTGGAAggtaaaaagaagaagaacaagaagaacaacAAGAGCGCGTTCATCGTCGACGTGGACGAGGACTTCCCCAGAGGCTTTCAGAAAAGCCCCCACAGCAGAGGAACCTGCACCCCGTCGTCCGCGGGGAAGCCTTTCAGGTCTGGCGGGCTGTTCGGCTCAGGGAGAAGCTCTTCAGAGAAGAGCaacaagaagaagaacagaatGAAGAAGTGGGAGAGGAAAGCAGCGAACGACCTGAAGAACCAGCCGTCTGACGAGAACCTGTTTCTAATCAAACAAAGGAAGCGTAGCAGAtaacggagagagagagtgtgtgtgtgtgtcagtgtgtgtgtgtgtgagagagagaatgagagagagaataagagaaaaagaaagaagagagagagaaagagtgagagatgcTGTGCAAGAAACAGTTGTTAATAAACGAGTTTCAGAATTTGTCTCCCTCTACTGGCCAAATTTACAGGTGCAGACACACACGCTTCTTCCAGTGCTGATCTTTCAGGAACAGCTTGAGCTAAAAGGCTAGCATGGCTAACAACAGATAAATAGGATAGACACCTTTACGTTTTCTATTGATATTTAATGCTAATTAATGGCTATTCACAATTATTGTTTATTCAAAGTTAGCGGTCTTAGCGTTTCTCAcagatatttaatttaattgaaaagGATTGGGTCAAACAAGCA

Function

NR:

description
PREDICTED: zinc finger CCHC domain-containing protein 7-like

GO: NA

KEGG:

id description
K12597 AIR1_2; protein AIR1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681743.1 True 2428 mRNA 0.50 10 6150690 6237111

Neighbor

gene id symbol gene type direction distance location
LOC103028109 NA coding downstream 10337 6127155 ~ 6140353 (-)
frmpd1 frmpd1,LOC107570223 coding downstream 50247 6052735 ~ 6100443 (-)
pgm2 pgm2,LOC107746017,LOC107591526,LOC107551595 coding downstream 102200 6030710 ~ 6048490 (-)
tbc1d1 tbc1d1 coding downstream 125756 5928738 ~ 6024934 (-)
LOC111195190 klf12b,klf12,LOC107668887,LOC107740907 coding downstream 260009 5866034 ~ 5890681 (-)
melk melk,LOC107750464 coding upstream 143292 6380403 ~ 6403796 (-)
LOC111195268 NA coding upstream 898664 7135775 ~ 7149290 (-)
LOC111195269 NA coding upstream 927327 7164438 ~ 7168366 (-)
LOC111195200 NA coding upstream 943767 7180878 ~ 7188349 (-)
LOC103027790 LOC108443989,LOC108260977,LOC105904014 coding upstream 954480 7191591 ~ 7201973 (-)
G183016 NA non-coding downstream 187340 5962458 ~ 5963350 (-)
G182956 NA non-coding downstream 315127 5834991 ~ 5835563 (-)
G182951 NA non-coding downstream 435571 5714694 ~ 5715119 (-)
G182949 NA non-coding downstream 436410 5713887 ~ 5714280 (-)
G182943 LOC108414272,LOC107741621,LOC107564376,LOC107559181,LOC108414004,LOC107559180,LOC108415460 non-coding downstream 440351 5709379 ~ 5710339 (-)
G183121 NA non-coding upstream 119170 6356281 ~ 6367173 (-)
G183134 NA non-coding upstream 237879 6474990 ~ 6666542 (-)
G183152 NA non-coding upstream 299084 6536195 ~ 6561601 (-)
G183158 NA non-coding upstream 354911 6592022 ~ 6636312 (-)
G183188 NA non-coding upstream 640036 6877147 ~ 6880030 (-)
G183043 NA other downstream 37598 6111370 ~ 6113092 (-)
LOC111195184 NA other downstream 854974 5285946 ~ 5295716 (-)
G182810 saraf other downstream 937539 5177376 ~ 5213151 (-)
LOC103027068 NA other downstream 1041592 5107036 ~ 5109098 (-)
G182501 NA other downstream 2600277 3547633 ~ 3550413 (-)
tmsb10 NA other upstream 115064 6352175 ~ 6408023 (-)
LOC111195197 zgc:195282,LOC108413380,LOC107702293,LOC107591529,LOC107754142,LOC108260812,LOC107656338 other upstream 184992 6422103 ~ 6426583 (-)
LOC103028119 gria2a,LOC108443988,LOC107548351,LOC108260487,LOC107750427,LOC107702389,LOC107745055,LOC107655932,LOC107591557 other upstream 928282 7165393 ~ 7303192 (-)
LOC111195271 NA other upstream 1252964 7490075 ~ 7502429 (-)
G183559 NA other upstream 3418202 9655313 ~ 9657614 (-)

Expression


Co-expression Network