ston1 (ston1)


Basic Information

Item Value
gene id ston1
gene name ston1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 11412610 ~ 11426503 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681854.1
gaggaggagtaggaaaggaggagtaggagaggaggagtagcaaaagtttctggacgcagccgtAGGAGGAGGGAGAGGACTTGGAGAGAGAGGACCGAGGGAGGGAGCAGCTTTTCCACTTATCTCTGCCATTTTGAAGCGATCCGGTCAGTCCAGCGGAACATCCCGAACCATGACCCGGTGCTGGACACGGACTGGAGCTGAGTATCTGAaTGATCCCTAAGGTGGGTTTCCTTCAGGCTGACTCCGGACAGAAATCTCaaatagttcaaacaacttttCCAGTACAATGTGTTCAACAAATCTTCCAGCTAACTGGGTGACATTTGAAGAGGAAGGGACCCCACTCCCGTCACCTCAGAAAACCGTTAGGTCTCCATCCTCAAGCTCAGGGTCAATTCCTCGCCCGAATGGTTTAAAGCTTGTTCTGCCTCCTTTAGGGAACCCATCTCTAAGCTTGTCCAGCCCTCTGGAATCTCCTCAAATGCACTTTACCCTCAATGGGAGCTCACGTGTGCCCAGCAACACTCCGATGTGTACTCCAGTGAGGGAGACACCAACTGGTCCATCTCCTTTTTACTCTAGCCCTCAAGGACAGTCTGACTTCTTCAACAGTTTTTCCAGTACACCAACCAGCATCTCCTCTCCTGAGAAAAGTGCCTCCAACTGGACTCCTGAGGTCTCCTTCCCATCATTCCAAGATGACCCAGGGCACTTTAGCCCTTTTTGGACAGAAAGCATACACAAGAGAGATTCTGGAAGCTCCTCCTCAGACTCGGAGCCCAGCTCAACCTTGCCTCGCTTCTTTATTCGAAGCAAGGATGGTTATGAGCCACCAAGAGACCATCTTCAAAACTCTTACTCCTACATATGCCACAAGTTAGAGCGACTAAGGGCAAAAGAGGACTATGAGGATGGAAATGGAAATGGGGAAAGGAGAGTTTCAGATGTTAGGACACTGAGGGATGCTGAGATTGGAGGCTGCCCTTCTTCCTTCGTTCCTCAGGAACTGTTCTTCAGCCAGAGGAGGCATGGTTGGGCTTTAATGCTGAGGATTCCGGAGAAAAAGAACCGTATGTCATCACGTCAGTGGGGTCCCATCTACTTGCAGCTGCTCCCAGGAGCTGTGCTCCAGATGTACTACGAGAAGGGATTGGAAAAACCGTTCAAGGAGTTCCAGCTTCATTCCAACTGCTCGCTCTCAGGCCTGAAACTAGAGAGCTATGGTGAGCAACGCAAGATCGCAACGTTGAAGATTGAGCATGTGCTGTACACAGAGCGAAAGCGCTATCACCCCAAGCCCGAAGTCACTCATGAAGCTGAGGTTGAGCAGCTGCTGAAGTTTGGAACAACAGACTTTGGAGACATGGAAGACTTGCTTGTGTCCCTTGAGGAGGAGCTGATGAGACTACCAGGTCCACATAAGCAACAAAAACATTATGAGGAGCAGGAGCTGTCCCTGCAGATTGCAGACCACATCTGGATGCGAGTAGACAAGGACGGAGCCACACTGGAACGTGCAGCCATTACTCGAATTCACTGTCTGGCCTTCTTGAATGGTCCAGGGGAATGTTTTCTGGCATTGAATGACCTTGCACTGCTGAGAAGAGACTCTGGATATGGCTCAGAGGAAGATGAGGAGGTGTGGATGGAGATTGAGGACTTCCATTTTCACAAGTGTGTGCGACAGTCAGAATATGAAGACACTAGACTGATTAAGTTTTCGCCACCTGATTCTTGCAAGGTGGAACTCATGCGCTACAGGACTGTATCCCTTAGTTGTGGCGAGCTGCCATTCTCGCTGAAGGCAATGGTCACTGTGCAAGGTGCCTATGTGGAGCTACAAGCTTTTCTCAATATGCAATCGTCCTTCCCTTTCCCTGGAGCAAATTCAGAGATGCAGCCAGTTTGTGAAAATGTGCTCATTCAGGTGCCATTGCCAGGTGACTGGGTCAAAATGCCTCGTAGTGTGTCGCTGCCATGGCAGAAATCACTGAAAGCCCGCATGAACAGGAATGCCTGTTTGGGCTCAGTGAACGTCACAGACTCTCATCCTGTCATGCAGGTAACTGTTGGTACAGTCAAGTATGAAAATGTGTACGGGTCCATTGTTTGGAGGATTGACAGGCTTCCTGCTAAGAACATGGCAGTGGACCATCCACACTCCTTCTCTTGTAAGCTGGAACTTGCATCAGACCAGGAGATCCCCTCTGACTGGTTCCCTTTCATCACCATGGAATGTGAGGTTGCATACACAGTTGCTTCGCATACTCGAGTGATATCTTTGGGCACAGAAAGCGACATTCAGCCTCAAAAACACATCAGCAGCAAGGCCTACTATAAATGTCAGGTGGAAATAGAGAAGAAGGTGATCGAAGCAGAATTACAGAAACCAACAAGTTGCGCGACGCAGTGATCCAGCATGTTCTCTAACTTTATCACACTTAAAACCAATGCATTAAATGTTCTTACTTTGGTCTGTTTGTTAACATTTACACGCATGGCTCTTCATTATTAAAGCATGAAATCATGTATTTGTTTGATAACCACAAAGTAAATACGATGCATAAGGTGTATTGCATTCTGCCAAAGCAATGCCTTCCAAAAAAGCTTGTTCAGTAGCCTACAGTATTGTTGCACTTTAGCCTGTATTCCAAGGCTGTCAATGGATGAAACATAATACACATGATCATGTATGAAAAGGAAATTCTTATTATGAGAAAAACCCTGCATTATcatgtaatattatttaataatgtctgttgtttaattgcattttgtttatacactgtaagcaataaacatatatttgcaGATGCTGTCTAAAGATCCTATTAAAGGTTTTAGTTCATTCCTGAAATTACATCTATGTCTATAGGAAAGAAAACCTGTACTGTTAACACTGCAGTATGCCTTCAATTAGCATACATGACCACCACTAATAAACTGTTCGTCATGAAATAGCGTAATGGTTAACAAATCCACCACCTTCTCCATGGCTGATTAGGATTTGAGGTCAAAAGtaacattaaaaattaaaacaacaaattcACCTTTCTGTGTTCTCTAAGAGCAACAGGAAAatgctgtaatttatttatctatttttatcatGGTTCACATAGTCTTACGATTTCACAGTCACACCCTAAATTACTAAATCATGATTAAAGtcataattaacattaattacaGTTTCAAAGACCCCAAAATGTAACCCTGTGGGATGCCATAAGATATGCTGTATAGTATAACCATCACACAATGTTACCcaaaaatttaaaatgcatttggATTAAGAACTGAATGATAGGGTTCAGGGGTTAGTGTACTTAGAACTTCAAGCTCTAAAACTGATGTTCTTGATATTATAATTGTTCCATTTCTATATCATACAAAAGTAGGTTGGATTACCACCACCAGATTTATGTTACAAGACACAAAAAGTAGAAAAGCAGAAACTTGAGTAAAGATTATTATTTTCCCATAAAATACAGATTAAGGAGCAGAAATATAAAACTAGCATTAGTAAACATAattgaaaaagtattttgtgtgtttttctgatttatttgacaagcatttattttatgtaaaaggccatacatataaataaaagaaatttaCAACAAGTTCTTACGTATATAAAGAGGGTCAACTCTAGGTCATTGTCTTGAGCTAGGTATGAATGACTTAATCAATGTTTAATGTTTCAAATAAAGTATTAGTAAAATAATGTTCTGTTTTCCACTGAAGGTGAATTTTTTTAATGGGTTGCTGCTTGGAGACAGAGGCTATGCATGCAAAAGGGAACCTGATGACTCCTTTCCCAGATCCACAGCCGGGACCACAGTGTCGGTTCAATGTGGCTCATACCAAAATGACCTTTGGGATTCTGAAGTCACGATTTAACAGTACTGCACAAAATAGCCATGATTAGGAAGGAGAGAGGCCCACCAGTGGAGCCACAGCCCCCTGAGTCGATCCAGTCACTTTGGGCCAACCAGAGGGCAGAGTTGTGAGACAGACAATTGCAGAACTATTCTTTAACTGTTAATAAAGACATGTTATATAAAAT

Function

symbol description
ston1 Predicted to enable clathrin adaptor activity. Involved in regulation of endocytosis. Predicted to be located in cell leading edge; cell projection; and clathrin-coated pit. Predicted to be active in clathrin-coated vesicle and synaptic vesicle.

NR:

description
PREDICTED: stonin-1

GO: NA

KEGG:

id description
K20067 STON1_2; stonin-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681854.1 True 4078 mRNA 0.43 4 11412610 11426503

Neighbor

gene id symbol gene type direction distance location
mogs mogs,LOC106609973,LOC106602766 coding downstream 905215 10498845 ~ 10507395 (-)
LOC103029885 LOC108434384,LOC108435548,LOC107702154 coding downstream 933436 10474402 ~ 10479174 (-)
fbxo41 fbxo41,LOC108260496,LOC107689471 coding downstream 983202 10332167 ~ 10429408 (-)
smox smox,LOC107689473,LOC107551695,LOC107551688,LOC107692173 coding downstream 1192749 10197406 ~ 10219861 (-)
LOC111195209 NA coding downstream 1247716 10162402 ~ 10164894 (-)
rps27a rps27a coding upstream 2746 11429249 ~ 11431897 (-)
ccdc88a ccdc88a coding upstream 84677 11511180 ~ 11574143 (-)
ppp4r3b ppp4r3b,smek2 coding upstream 156335 11582838 ~ 11594672 (-)
pnpt1 pnpt1,LOC106607983 coding upstream 170775 11597278 ~ 11611851 (-)
cfap36 cfap36 coding upstream 187153 11613656 ~ 11627474 (-)
G183884 NA non-coding downstream 65447 11346910 ~ 11347163 (-)
G183857 NA non-coding downstream 225068 10955599 ~ 11187542 (-)
LOC111195215 NA non-coding downstream 235426 11157282 ~ 11177184 (-)
G183854 NA non-coding downstream 568011 10844201 ~ 10844599 (-)
G183840 NA non-coding downstream 753276 10658997 ~ 10659334 (-)
G183960 NA non-coding upstream 41354 11467857 ~ 11468253 (-)
G183963 NA non-coding upstream 50133 11476636 ~ 11479389 (-)
LOC111195221 NA non-coding upstream 1102071 12528574 ~ 12633591 (-)
G184094 NA non-coding upstream 1255992 12682495 ~ 12682697 (-)
G184150 NA non-coding upstream 1366279 12792782 ~ 12794964 (-)
gtf2a1l NA other downstream 966 11402707 ~ 11411644 (-)
G183880 NA other downstream 105789 11306289 ~ 11306821 (-)
G183585 NA other downstream 1560229 9845822 ~ 9852381 (-)
G183559 NA other downstream 1754996 9655313 ~ 9657614 (-)
LOC111195271 NA other downstream 3910181 7490075 ~ 7502429 (-)
G184051 NA other upstream 768709 12195212 ~ 12196658 (-)
LOC111195225 NA other upstream 1799830 13226333 ~ 13303680 (-)
LOC111195226 NA other upstream 2124629 13551132 ~ 13594753 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other upstream 2562306 13988809 ~ 14040245 (-)
LOC103032041 NA other upstream 2637141 14063644 ~ 14116456 (-)

Expression


Co-expression Network