LOC103027134 (tp53bp2)


Basic Information

Item Value
gene id LOC103027134
gene name tp53bp2
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 21349559 ~ 21392008 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682121.1
GGCTGGTAGGAGGACTCGGTAACTCGTTTGGATATTCGAGGCGGTCGCGGACGGGTCGGGAAAAAATGTCCTGAAAAACTGGATTTAAGGAGAAAAACTCGGAAATTGGACAAAAACTCGGATGTTTAGAGTGTCCCTGACTGGATTACAGAGGCGTTTCGGAAAAGTTCGGTGTGTTTTAGGAGGTATCCTGCTCGGAAACGGAGGAGACGGAGCTCCGCGCAGGTAAACTTTCCTGAGGCGTTAGCTTCGTGCTAACAGCGCCGCCTGAGAACCCGATACTCCGACCCGCTTCTACCGAACTTTCCCCCGGGAAAACCGAGGCCTCGGACCGCGGACCCACCCGCAACAGGTCCCTCCGGATACTAAACAAAGGAGATAAGTtctaaaaagagtttttttctgTGAGAAAAAGACGAGAAAAGGAGAAAACGCTGGAAAAAGTGTGGAATACTTTAACGGTCGCTAGTTAACGCTAACCAACTGATCACTGTGTGAAGAAtatagttagcttagcttagctacaAGTGTTTATTCTGAgtcaaaaaactaaacaaataaaacggaCAATAATTGGATTAAATGCGATACGATTCAAAAAATGATGCCGATGTTCTTGACCGTGTACCTCAGTAACAACGACCAGCATTTTACGGAGGTGCCCATCACTCCAGAGACAGTGTGCCGGGATGTTGTGGATCTCTGCAAAGAGCCTGGAGAGGCGGACTGTCACCTGGCTGAGATGTGGAGAGGCTCAGagAGAGTGGTGGGAGAGGGGGAGAAGATGCTGGAGCTGTTGCAGCGCTGGGGATCACACCGGGCCGAAGTTCGCTTCTTCCTTCGACACAACCGAGCGCCCGGCCGCGACGCAGGGAATGCCAGAGGGATGGAGCAGAAGAGGAATGGTGTAAAGGGACCGTCAGATAGACGGATGGAGAACGGGGTAGCTGCTCCGCGGATGGACATGACGTTGGCGGAGCTGCAGGAGATGGCAgcgcggcagcagcagcagatcgaTGCTCAGCAGCAGCTTCTGGCCTCCAAGGAGCAGCGGCTGCGGTACCTGAAGCAGCAGGagcagaggcagcagcagcaggactcCGAGCAAGAGAAGCTCCAGCGTCTGAGGGAGAACGTGGAGAAGCAGGAGGCCAGGCTGAAGAAAGTACGAGCTCTGAAGGGGCAGGTGGAGCAGAAGCGTCTCAGCAACGGGAAACTGGTGGAGGAGATCGAGCAGATGAATAATCTGTTCCAGCAGAAGCAGAGGGAGCTGGTGGTGGCCGTATCTAAAGTGGAGGAGCTGAGCCGGCAGCTGGAGATGCTGAAGAATGGAAAGGTGGACGCTCTAAACGACAACCAGAGCTCTGTAGCTGAGCTGGACCGGCTCTACAGGGAGCTACAGCTGAGGAACAATATGAACCAGGAGCAGAGcaagctgcagcagcagagggaGAACCTGAATAAGAAGAATCAGGAGGTGGCGGTGATGGATAAGAGAGTCAGTGAGCTGAGGGATCGGCTGTGGAAGAAGAAGGCGGCGTTACAGCAGAAGGAGAACCTACCTGTGCCGTCTGAAGGTCAGGCCCTGCAGCAGGTGGGTCCGTCTCGGGTGGCTGCGGTTGGGCCGTATATCCAGTCGTCCACCATGCCTCGCGGCCAAGTGAGACACGAGACCCTGCTGGTGAAGCCCACCTACCCCGACGGCACCGCCACGCTGCCCACCCAGGAGAGGAGTGCTGCCCTCGCCCACGGCAAACCTGGCCCAGaagCAATGTTCTTGCTTAAGCCTCTGAAAGAGCTGCGGGCCAAAAGAAAAGggCTCCATCCAGGGAAGGTGTCGGACAGGAGCTCAGTTCCTGCAGATTCCAGCACCCTCCAcgtctcctccacctcctcctccaccctcCCTCGGATGCCCAGCCAGGCCCTGGCAGAGCAAGATGACGCAGAAGTCCTGAAACGTGGTCAGCAGGACCGGAGGACGCGTCCCGTCTCCATGTTCGAGCCCACCGAGCAGCCGGCGGCGTCCCTACGCAAGAACCAGAGCAGCGAGGACCTCGTGAGGGACGCCCAGACTGCGGTTAAAAACACGGTGAAGATTCCTCCTCCAGTTCCGAGCAAACCCAGACAGGTAAACCTGCCCTCAGGTGCTCAAATCGGCTACAGCAAGACCGGCCTCAACACCGGAACCTTCCCCGGCAAGAGCAAACCGGCCAATCAGCAGCAGCCTGGTGCCCCCCACGCCCGCGTACCCCTGCCCCCCGTCCAGAGCAACACCCTCCCCCTGCCCTCCAAACAGGAGGCGCCGCCCGCCGCCACGGTGCGACCTTTCACCCCCGAGCCCCCCGGGGCTAAGGACGCTGCCGCCGGTCATTCCTTCCAGAAGCCCCAGACGCTGGCGGCCAGCTCCATCTACTCCATGTACACCAAACAGCCCACGCCCGGCAAGCCCTACCCGCAGATGGTGCAGGGGGCGCACAACCGCTCCCAGCCCCGCAACAACTTCATCAGCGTTTACGGCAAACCAGTGATCCCAGCAGGTCAACAATCCCCATCCCAGCACATAGAGAACCCCTACCTGGATCGGGCAGTCGGCTCGGAGACCGAACCCGACCACGCCACGAGCGGCAGCCCGGCTCCAGAGAACCAGGAGACGGAGCGAATCCCAAGACCACTGAGCCCCACCAAGCTCCTCCCCTTCATTTCCAACCCCTACCGCAACCAGAGCGACGTAGACCTGGAAGCTCTGCGGAAGAAGCTCTACAACGCTCCCAGACCTTTAAAGAAGCGCAGCTCCATTACCGAACCTGAGGGACCTGCTGGCCCCAACATCCAGAAGCTCCTCTACCAGAAGACCACGCTGGCGGCGATGGAGACCACCGTGAACTCCCCGAGTCCTGCGGAGGAGGAGAGCGCACCGGCGTCCGAACCCCAATCCAAATCCCTCCTCCCGGAAACGCCTCCGCCTGAGGTACCCGAACAACCACGCGTCGACCCCCCGTCAGCACCTACGACCGTGCTGAAGATCGACGGCGAAGACTTCATCCCCCCTCCACCGCCTCCGCATCCGGCCCCCCGCCCCGACGAGTCCCTCCTACCGCCACCCCCTCCCCCTGCACCCGAGGAACCGTCGCTCGGGATTCTGCCACCATCCGAGAGCTACGTGGAGGAGTTCCCTCCGTACCCTCCTCCACCCTACCCCAGCGGTGCAGAGCAGGAGGCTCTGGGAGAAGATACCTTCAACATGAAGCCGCCTGAGGTCACAGGACAGGTTCCTCTACCACCTGGTAAGAGGACGAACCTGAGGAAGGTTGGATCTGAGAGAATCGATCACAGCATGAGGGTGAAGTTTAACCCCCTGGCTCTTCTTCTGGACTCGTCTCTGGAGGGGGAGTATGATCTGGTGCAGAGGATCATCTATGAGGTTGAGGACCCAAGTCAACCCAACGATGAGGGAATCACAGCTCTACACAACGCTGTCTGTGCCGGTCACACAGAGATCGTTAAATTCCTGGTGCAGTTTGGAGTCAATGTGAACGCAGCCGATAGTGACGGCTGGACCCCGCTGCACTGCGCCGCCTCCTGTAATAACGTACAGGTGTGTAAGTTTCTGGTGGAGTCTGGAGCCGCCGTGTTCGCCACCACCTACAGCGACATGCAGACGGCTGCAGATAAGTgtgaggagatggaggagggATACACCCAGTGCTCACAGTTCCTCTACGgCGTGCAGGAGAAGATGGGCATCATGAACAGGGGCGTGGTTTACGCTCTGTGGGATTATGAGAGGGAGGAGGGGGACGAGCTGCAGTTCAGAGAGGGGGACTGTATGACGGTGGTGAGGAGGGAGGATGAAGATGAGGTGGAGTGGTGGTGGGCGAGGATGAGCGACAGGGAGGGGTATATCCCCAGGAACCTGCTCGGGCTTTACCCAAGAATAAAACCACGGCAGAGGAGCCTGGCCTAGACCCTTCTacagacggatggatggatggatggatggatggacggatggatgaaATGTGATGCTGTAGGACTTTTTTTCTCCATATCCTTCACAGAGGAAGTGAAACACTCAGTATCTTTAGACCAATCCTGGAGGACCTCTGATTGGACGAAGAGACCAAAACATGAAGGAttttttatcatcattattattaataacagtaataacggAACTGAACACTGCGGATGGGTTTTGGACCACTGACCGTTTCGGCTCATCTGAGGCACTTTTCTAATTTTACGTCGGATTTACACGTTTTTCCTCACTTTGTCTGCGTCGAGAACAGAACTGAATATAACGGCGTAAATCTGGAA

Function

symbol description
tp53bp2 Enables NF-kappaB binding activity; identical protein binding activity; and p53 binding activity. Involved in intrinsic apoptotic signaling pathway by p53 class mediator and positive regulation of execution phase of apoptosis. Located in cell junction; cytosol; and nucleus. Colocalizes with perinuclear region of cytoplasm.

NR:

description
PREDICTED: apoptosis-stimulating of p53 protein 2

GO: NA

KEGG:

id description
K16823 TP53BP2, ASPP2; apoptosis-stimulating of p53 protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682121.1 True 4320 mRNA 0.57 20 21349559 21392008

Neighbor

gene id symbol gene type direction distance location
kcnip2 kcnip2,LOC101469196,LOC106526488,LOC105900836,LOC106576844 coding downstream 75732 21136762 ~ 21273827 (-)
LOC103026251 NA coding downstream 241525 21059184 ~ 21108034 (-)
LOC111195255 LOC107558209 coding downstream 296891 21036881 ~ 21052668 (-)
arhgap19 arhgap19 coding downstream 409127 20932530 ~ 20940432 (-)
LOC103027406 NA coding downstream 590830 20753938 ~ 20758729 (-)
LOC103024822 NA coding upstream 137453 21529461 ~ 21532413 (-)
LOC103024095 lgi3,lgi1a,LOC108260544,LOC107701579,LOC107565913,LOC107753733 coding upstream 210008 21602016 ~ 21618998 (-)
ffar4 NA coding upstream 232432 21624440 ~ 21628770 (-)
LOC111195258 NA coding upstream 237594 21629602 ~ 21636692 (-)
G186096 NA non-coding downstream 1288 21346360 ~ 21348271 (-)
G186031 NA non-coding downstream 219382 21126219 ~ 21130177 (-)
G186022 NA non-coding downstream 231127 21114162 ~ 21118432 (-)
G186026 NA non-coding downstream 243274 21106067 ~ 21106285 (-)
G185976 NA non-coding downstream 422919 20919092 ~ 20926640 (-)
G186110 NA non-coding upstream 3011 21395019 ~ 21395732 (-)
G186136 NA non-coding upstream 44799 21436807 ~ 21445436 (-)
G186175 NA non-coding upstream 96885 21488893 ~ 21489095 (-)
G186180 NA non-coding upstream 120613 21512621 ~ 21517622 (-)
G186186 LOC108414040,LOC108271264,LOC107698240 non-coding upstream 161398 21553406 ~ 21577296 (-)
LOC103038058 slit1 other downstream 432935 20764128 ~ 20916624 (-)
G185990 NA other downstream 597286 20748164 ~ 20752273 (-)
LOC103028253 ndrg2,LOC108437864,LOC107574080,LOC107657174,LOC106577998 other downstream 670945 20640338 ~ 20678614 (-)
G185943 NA other downstream 722297 20571189 ~ 20627262 (-)
LOC111195252 LOC108260666,LOC108412153 other downstream 1222467 20117426 ~ 20127092 (-)

Expression


Co-expression Network