trnar-ccu_39


Basic Information

Item Value
gene id trnar-ccu_39
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 16642659 ~ 16642731 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnar-ccu_39
ggctccatagctcagtggACAGAGCGCTGGTCTCCTAAACCAGAGGTCGCGAGTTCGATTCTCGCTGGAGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccu_39 True 73 tRNA 0.59 1 16642659 16642731

Neighbor

gene id symbol gene type direction distance location
trnaq-uug_3 NA coding downstream 56 16642531 ~ 16642603 (-)
trnar-ucg_17 NA coding downstream 414 16642173 ~ 16642245 (-)
trnar-acg_19 NA coding downstream 517 16642068 ~ 16642142 (-)
trnar-ucg_16 NA coding downstream 621 16641966 ~ 16642038 (-)
trnar-acg_18 NA coding downstream 723 16641864 ~ 16641936 (-)
fabp2 fabp2,LOC108434304,LOC107714631,LOC107572697,LOC107700317,LOC107695844 coding upstream 107921 16750652 ~ 16756899 (-)
gucy1b3 gucy1b3,LOC107714654,LOC107757623 coding upstream 122696 16765427 ~ 16798748 (-)
gucy1a3 gucy1a3,LOC107572203,LOC107695445,LOC107700279,LOC107598251 coding upstream 161846 16804577 ~ 16827354 (-)
npy2r npy2r,LOC107700264 coding upstream 228286 16871017 ~ 16874481 (-)
fhdc1 fhdc1 coding upstream 400144 17042875 ~ 17059662 (-)
G184987 NA non-coding downstream 6724 16635490 ~ 16635935 (-)
G184964 NA non-coding downstream 11236 16568548 ~ 16631423 (-)
G184975 NA non-coding downstream 46409 16588066 ~ 16596250 (-)
G184962 NA non-coding downstream 79211 16562389 ~ 16563448 (-)
G184959 NA non-coding downstream 86981 16555254 ~ 16555678 (-)
G184990 NA non-coding upstream 760 16643491 ~ 16643928 (-)
G184991 NA non-coding upstream 1266 16643997 ~ 16644276 (-)
G184993 NA non-coding upstream 4679 16647410 ~ 16703493 (-)
G184996 NA non-coding upstream 13066 16655797 ~ 16657592 (-)
G184998 NA non-coding upstream 31394 16674125 ~ 16675009 (-)
smim14 smim14 other downstream 970705 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 1261451 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 1302079 15309509 ~ 15340580 (-)
trnas-gcu_6 NA other downstream 2551069 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 2552872 14089706 ~ 14089787 (-)
lrat lrat other upstream 255447 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 587354 17230085 ~ 17241027 (-)
G185295 NA other upstream 609536 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 652770 17295501 ~ 17300782 (-)
nutm1 NA other upstream 670639 17313370 ~ 17328889 (-)

Expression


Co-expression Network