trnar-ucg_17


Basic Information

Item Value
gene id trnar-ucg_17
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 16642173 ~ 16642245 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnar-ucg_17
ggctccatagctcagtggACAGAGCGCTGGTCTTCGAAACCAGAGGTCGCGAGTTCGATCCTCGCTGGAGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ucg_17 True 73 tRNA 0.60 1 16642173 16642245

Neighbor

gene id symbol gene type direction distance location
trnar-acg_19 NA coding downstream 31 16642068 ~ 16642142 (-)
trnar-ucg_16 NA coding downstream 135 16641966 ~ 16642038 (-)
trnar-acg_18 NA coding downstream 237 16641864 ~ 16641936 (-)
trnar-ucg_15 NA coding downstream 339 16641762 ~ 16641834 (-)
trnar-acg_17 NA coding downstream 441 16641660 ~ 16641732 (-)
trnaq-uug_3 NA coding upstream 286 16642531 ~ 16642603 (-)
trnar-ccu_39 NA coding upstream 414 16642659 ~ 16642731 (-)
fabp2 fabp2,LOC108434304,LOC107714631,LOC107572697,LOC107700317,LOC107695844 coding upstream 108407 16750652 ~ 16756899 (-)
gucy1b3 gucy1b3,LOC107714654,LOC107757623 coding upstream 123182 16765427 ~ 16798748 (-)
gucy1a3 gucy1a3,LOC107572203,LOC107695445,LOC107700279,LOC107598251 coding upstream 162332 16804577 ~ 16827354 (-)
G184987 NA non-coding downstream 6238 16635490 ~ 16635935 (-)
G184964 NA non-coding downstream 10750 16568548 ~ 16631423 (-)
G184975 NA non-coding downstream 45923 16588066 ~ 16596250 (-)
G184962 NA non-coding downstream 78725 16562389 ~ 16563448 (-)
G184959 NA non-coding downstream 86495 16555254 ~ 16555678 (-)
G184990 NA non-coding upstream 1246 16643491 ~ 16643928 (-)
G184991 NA non-coding upstream 1752 16643997 ~ 16644276 (-)
G184993 NA non-coding upstream 5165 16647410 ~ 16703493 (-)
G184996 NA non-coding upstream 13552 16655797 ~ 16657592 (-)
G184998 NA non-coding upstream 31880 16674125 ~ 16675009 (-)
smim14 smim14 other downstream 970219 15666111 ~ 15671954 (-)
smim18 smim18 other downstream 1260965 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 1301593 15309509 ~ 15340580 (-)
trnas-gcu_6 NA other downstream 2550583 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 2552386 14089706 ~ 14089787 (-)
lrat lrat other upstream 255933 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 587840 17230085 ~ 17241027 (-)
G185295 NA other upstream 610022 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 653256 17295501 ~ 17300782 (-)
nutm1 NA other upstream 671125 17313370 ~ 17328889 (-)

Expression


Co-expression Network