Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaw-cca_46 |
| gene name | NA |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 16576823 ~ 16576895 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaw-cca_46 | True | 73 | tRNA | 0.60 | 1 | 16576823 | 16576895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mab21l2 | mab21l2 | coding | downstream | 220814 | 16351574 ~ 16356009 (-) |
| rps3a | rps3a,LOC107695588 | coding | downstream | 392011 | 16180070 ~ 16184812 (-) |
| fam160a1 | fam160a1 | coding | downstream | 435553 | 16119674 ~ 16141270 (-) |
| dctpp1 | dctpp1 | coding | downstream | 480503 | 16095030 ~ 16096320 (-) |
| gpr75 | gpr75,LOC107602942,LOC107683917,LOC107654975,LOC107553188,LOC107705414,LOC107739897 | coding | downstream | 809043 | 15763186 ~ 15767780 (-) |
| trnar-ucg_6 | NA | coding | upstream | 30 | 16576925 ~ 16576997 (-) |
| trnar-ccg_7 | NA | coding | upstream | 133 | 16577028 ~ 16577100 (-) |
| trnar-ucu_5 | NA | coding | upstream | 235 | 16577130 ~ 16577202 (-) |
| trnar-ucu_6 | NA | coding | upstream | 337 | 16577232 ~ 16577303 (-) |
| trnar-ucg_7 | NA | coding | upstream | 438 | 16577333 ~ 16577405 (-) |
| G184962 | NA | non-coding | downstream | 13375 | 16562389 ~ 16563448 (-) |
| G184959 | NA | non-coding | downstream | 21145 | 16555254 ~ 16555678 (-) |
| G184958 | NA | non-coding | downstream | 21832 | 16554775 ~ 16554991 (-) |
| G184957 | NA | non-coding | downstream | 22511 | 16553999 ~ 16554312 (-) |
| G184944 | NA | non-coding | downstream | 35084 | 16494547 ~ 16541739 (-) |
| G184975 | NA | non-coding | upstream | 11171 | 16588066 ~ 16596250 (-) |
| G184987 | NA | non-coding | upstream | 58595 | 16635490 ~ 16635935 (-) |
| G184990 | NA | non-coding | upstream | 66596 | 16643491 ~ 16643928 (-) |
| G184991 | NA | non-coding | upstream | 67102 | 16643997 ~ 16644276 (-) |
| G184993 | NA | non-coding | upstream | 70515 | 16647410 ~ 16703493 (-) |
| smim14 | smim14 | other | downstream | 904869 | 15666111 ~ 15671954 (-) |
| smim18 | smim18 | other | downstream | 1195615 | 15376658 ~ 15381208 (-) |
| LOC103043525 | tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 | other | downstream | 1236243 | 15309509 ~ 15340580 (-) |
| trnas-gcu_6 | NA | other | downstream | 2485233 | 14091509 ~ 14091590 (-) |
| trnas-gcu_5 | NA | other | downstream | 2487036 | 14089706 ~ 14089787 (-) |
| lrat | lrat | other | upstream | 321283 | 16898178 ~ 16901684 (-) |
| LOC103032582 | NA | other | upstream | 653190 | 17230085 ~ 17241027 (-) |
| G185295 | NA | other | upstream | 675372 | 17252267 ~ 17254633 (-) |
| G185311 | emc4 | other | upstream | 718606 | 17295501 ~ 17300782 (-) |
| nutm1 | NA | other | upstream | 736475 | 17313370 ~ 17328889 (-) |
